Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MMP20O60882 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
MMP20O60882 AC008813.1-201ENST00000536597 885 ntBASIC25.46■■□□□ 1.67
MMP20O60882 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MMP20O60882 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
MMP20O60882 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.46■■□□□ 1.67
MMP20O60882 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
MMP20O60882 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP20O60882 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
MMP20O60882 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.44■■□□□ 1.66
MMP20O60882 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MMP20O60882 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MMP20O60882 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.44■■□□□ 1.66
MMP20O60882 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.44■■□□□ 1.66
MMP20O60882 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
MMP20O60882 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.44■■□□□ 1.66
MMP20O60882 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.44■■□□□ 1.66
MMP20O60882 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
MMP20O60882 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.43■■□□□ 1.66
MMP20O60882 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.43■■□□□ 1.66
MMP20O60882 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MMP20O60882 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
MMP20O60882 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
MMP20O60882 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
MMP20O60882 ABCB10P3-201ENST00000561950 2166 ntBASIC25.41■■□□□ 1.66
MMP20O60882 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
MMP20O60882 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.4■■□□□ 1.66
MMP20O60882 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.4■■□□□ 1.66
MMP20O60882 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
MMP20O60882 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MMP20O60882 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MMP20O60882 HSD17B1P1-201ENST00000590052 955 ntBASIC25.39■■□□□ 1.66
MMP20O60882 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MMP20O60882 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
MMP20O60882 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.38■■□□□ 1.65
MMP20O60882 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.38■■□□□ 1.65
MMP20O60882 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
MMP20O60882 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
MMP20O60882 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.37■■□□□ 1.65
MMP20O60882 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MMP20O60882 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.37■■□□□ 1.65
MMP20O60882 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.37■■□□□ 1.65
MMP20O60882 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.37■■□□□ 1.65
MMP20O60882 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MMP20O60882 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
MMP20O60882 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
MMP20O60882 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
MMP20O60882 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
MMP20O60882 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.36■■□□□ 1.65
MMP20O60882 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MMP20O60882 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
MMP20O60882 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
MMP20O60882 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
MMP20O60882 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
MMP20O60882 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.32■■□□□ 1.64
MMP20O60882 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
MMP20O60882 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.31■■□□□ 1.64
MMP20O60882 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.31■■□□□ 1.64
MMP20O60882 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.31■■□□□ 1.64
MMP20O60882 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MMP20O60882 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
MMP20O60882 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MMP20O60882 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.3■■□□□ 1.64
MMP20O60882 AC148477.6-201ENST00000623746 465 ntBASIC25.3■■□□□ 1.64
MMP20O60882 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.3■■□□□ 1.64
MMP20O60882 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MMP20O60882 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MMP20O60882 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
MMP20O60882 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.29■■□□□ 1.64
MMP20O60882 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.29■■□□□ 1.64
MMP20O60882 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
MMP20O60882 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MMP20O60882 MIR219A2-201ENST00000608502 1504 ntBASIC25.28■■□□□ 1.64
MMP20O60882 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
MMP20O60882 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.28■■□□□ 1.64
MMP20O60882 AC139426.1-201ENST00000568218 2529 ntBASIC25.28■■□□□ 1.64
MMP20O60882 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
MMP20O60882 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
MMP20O60882 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
MMP20O60882 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.27■■□□□ 1.64
MMP20O60882 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MMP20O60882 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
MMP20O60882 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.27■■□□□ 1.64
MMP20O60882 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
MMP20O60882 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.27■■□□□ 1.64
MMP20O60882 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.26■■□□□ 1.63
MMP20O60882 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.26■■□□□ 1.63
MMP20O60882 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
MMP20O60882 GPX1-201ENST00000419349 1106 ntBASIC25.26■■□□□ 1.63
MMP20O60882 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.26■■□□□ 1.63
MMP20O60882 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
MMP20O60882 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MMP20O60882 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
MMP20O60882 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
MMP20O60882 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
MMP20O60882 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
MMP20O60882 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.25■■□□□ 1.63
MMP20O60882 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms