Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.81■■□□□ 1.4
PLOD3O60568 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.81■■□□□ 1.4
PLOD3O60568 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PLOD3O60568 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PLOD3O60568 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
PLOD3O60568 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PLOD3O60568 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PLOD3O60568 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PLOD3O60568 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PLOD3O60568 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.8■■□□□ 1.4
PLOD3O60568 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PLOD3O60568 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.8■■□□□ 1.4
PLOD3O60568 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.8■■□□□ 1.4
PLOD3O60568 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PLOD3O60568 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PLOD3O60568 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PLOD3O60568 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PLOD3O60568 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PLOD3O60568 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PLOD3O60568 AP002414.2-202ENST00000590929 1450 ntBASIC23.78■■□□□ 1.4
PLOD3O60568 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PLOD3O60568 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PLOD3O60568 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PLOD3O60568 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PLOD3O60568 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.77■■□□□ 1.4
PLOD3O60568 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PLOD3O60568 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
PLOD3O60568 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PLOD3O60568 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PLOD3O60568 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.76■■□□□ 1.39
PLOD3O60568 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PLOD3O60568 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PLOD3O60568 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PLOD3O60568 LINC01971-201ENST00000617888 1048 ntBASIC23.73■■□□□ 1.39
PLOD3O60568 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PLOD3O60568 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.73■■□□□ 1.39
PLOD3O60568 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PLOD3O60568 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.72■■□□□ 1.39
PLOD3O60568 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.72■■□□□ 1.39
PLOD3O60568 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PLOD3O60568 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.72■■□□□ 1.39
PLOD3O60568 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PLOD3O60568 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.71■■□□□ 1.39
PLOD3O60568 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PLOD3O60568 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PLOD3O60568 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PLOD3O60568 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
PLOD3O60568 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.7■■□□□ 1.38
PLOD3O60568 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.7■■□□□ 1.38
PLOD3O60568 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PLOD3O60568 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PLOD3O60568 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
PLOD3O60568 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PLOD3O60568 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
PLOD3O60568 ZNRF2P2-203ENST00000454624 420 ntBASIC23.68■■□□□ 1.38
PLOD3O60568 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PLOD3O60568 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PLOD3O60568 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PLOD3O60568 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PLOD3O60568 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.67■■□□□ 1.38
PLOD3O60568 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PLOD3O60568 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PLOD3O60568 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PLOD3O60568 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PLOD3O60568 AC110285.7-201ENST00000624417 1536 ntBASIC23.65■■□□□ 1.38
PLOD3O60568 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.65■■□□□ 1.38
PLOD3O60568 ABHD17AP4-201ENST00000411545 909 ntBASIC23.65■■□□□ 1.38
PLOD3O60568 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PLOD3O60568 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PLOD3O60568 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PLOD3O60568 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PLOD3O60568 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PLOD3O60568 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.63■■□□□ 1.37
PLOD3O60568 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PLOD3O60568 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PLOD3O60568 BX255925.1-201ENST00000566954 1854 ntBASIC23.63■■□□□ 1.37
PLOD3O60568 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.62■■□□□ 1.37
PLOD3O60568 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.62■■□□□ 1.37
PLOD3O60568 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.62■■□□□ 1.37
PLOD3O60568 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PLOD3O60568 LINC01003-201ENST00000564834 1764 ntBASIC23.62■■□□□ 1.37
PLOD3O60568 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PLOD3O60568 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.61■■□□□ 1.37
PLOD3O60568 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PLOD3O60568 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PLOD3O60568 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PLOD3O60568 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PLOD3O60568 AC018358.1-201ENST00000631079 1402 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L13-201ENST00000554103 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L15-201ENST00000611059 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L11-201ENST00000611504 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L12-201ENST00000614593 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L23-201ENST00000615195 1269 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L24-201ENST00000617576 1269 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L22-201ENST00000618238 1269 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L20-201ENST00000619712 1269 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L14-201ENST00000621227 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L21-201ENST00000622058 1269 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L10-201ENST00000622460 1267 ntBASIC23.6■■□□□ 1.37
PLOD3O60568 DUX4L25-201ENST00000624915 1269 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms