Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHS1O60500 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.79■■□□□ 1.56
NPHS1O60500 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
NPHS1O60500 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPHS1O60500 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.78■■□□□ 1.56
NPHS1O60500 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.78■■□□□ 1.56
NPHS1O60500 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
NPHS1O60500 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.77■■□□□ 1.56
NPHS1O60500 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
NPHS1O60500 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
NPHS1O60500 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.77■■□□□ 1.56
NPHS1O60500 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NPHS1O60500 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.76■■□□□ 1.55
NPHS1O60500 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.76■■□□□ 1.55
NPHS1O60500 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
NPHS1O60500 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
NPHS1O60500 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.76■■□□□ 1.55
NPHS1O60500 AC018358.1-201ENST00000631079 1402 ntBASIC24.76■■□□□ 1.55
NPHS1O60500 AC135983.2-203ENST00000454486 1613 ntBASIC24.75■■□□□ 1.55
NPHS1O60500 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPHS1O60500 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
NPHS1O60500 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
NPHS1O60500 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.75■■□□□ 1.55
NPHS1O60500 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
NPHS1O60500 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
NPHS1O60500 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
NPHS1O60500 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
NPHS1O60500 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
NPHS1O60500 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.73■■□□□ 1.55
NPHS1O60500 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
NPHS1O60500 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPHS1O60500 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
NPHS1O60500 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPHS1O60500 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
NPHS1O60500 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
NPHS1O60500 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.7■■□□□ 1.54
NPHS1O60500 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.7■■□□□ 1.54
NPHS1O60500 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.69■■□□□ 1.54
NPHS1O60500 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.69■■□□□ 1.54
NPHS1O60500 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
NPHS1O60500 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPHS1O60500 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
NPHS1O60500 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.68■■□□□ 1.54
NPHS1O60500 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
NPHS1O60500 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.68■■□□□ 1.54
NPHS1O60500 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
NPHS1O60500 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.68■■□□□ 1.54
NPHS1O60500 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
NPHS1O60500 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
NPHS1O60500 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
NPHS1O60500 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
NPHS1O60500 WHAMMP2-203ENST00000563942 1603 ntBASIC24.67■■□□□ 1.54
NPHS1O60500 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
NPHS1O60500 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NPHS1O60500 AC005559.1-201ENST00000589661 871 ntBASIC24.66■■□□□ 1.54
NPHS1O60500 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
NPHS1O60500 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
NPHS1O60500 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
NPHS1O60500 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NPHS1O60500 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
NPHS1O60500 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
NPHS1O60500 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
NPHS1O60500 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
NPHS1O60500 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
NPHS1O60500 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NPHS1O60500 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
NPHS1O60500 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
NPHS1O60500 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NPHS1O60500 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.63■■□□□ 1.53
NPHS1O60500 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
NPHS1O60500 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.63■■□□□ 1.53
NPHS1O60500 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.63■■□□□ 1.53
NPHS1O60500 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.53
NPHS1O60500 AC108673.1-201ENST00000510422 1159 ntBASIC24.63■■□□□ 1.53
NPHS1O60500 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
NPHS1O60500 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPHS1O60500 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPHS1O60500 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.62■■□□□ 1.53
NPHS1O60500 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.62■■□□□ 1.53
NPHS1O60500 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.62■■□□□ 1.53
NPHS1O60500 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPHS1O60500 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
NPHS1O60500 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.61■■□□□ 1.53
NPHS1O60500 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
NPHS1O60500 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
NPHS1O60500 LINC00273-201ENST00000539813 1452 ntBASIC24.61■■□□□ 1.53
NPHS1O60500 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.61■■□□□ 1.53
NPHS1O60500 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NPHS1O60500 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
NPHS1O60500 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NPHS1O60500 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NPHS1O60500 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
NPHS1O60500 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.59■■□□□ 1.53
NPHS1O60500 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NPHS1O60500 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms