Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA1O15239 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA1O15239 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NDUFA1O15239 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFA1O15239 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA1O15239 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA1O15239 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFA1O15239 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA1O15239 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFA1O15239 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA1O15239 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA1O15239 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA1O15239 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA1O15239 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA1O15239 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NDUFA1O15239 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA1O15239 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDUFA1O15239 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 AC091060.1-201ENST00000623524 1766 ntBASIC17.19■□□□□ 0.34
NDUFA1O15239 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA1O15239 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
NDUFA1O15239 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NDUFA1O15239 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NDUFA1O15239 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
NDUFA1O15239 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.17■□□□□ 0.34
NDUFA1O15239 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA1O15239 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDUFA1O15239 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA1O15239 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.16■□□□□ 0.34
NDUFA1O15239 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDUFA1O15239 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDUFA1O15239 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
NDUFA1O15239 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NDUFA1O15239 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA1O15239 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.15■□□□□ 0.34
NDUFA1O15239 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.15■□□□□ 0.34
NDUFA1O15239 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.15■□□□□ 0.34
NDUFA1O15239 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDUFA1O15239 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NDUFA1O15239 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
NDUFA1O15239 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.14■□□□□ 0.33
NDUFA1O15239 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NDUFA1O15239 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
NDUFA1O15239 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NDUFA1O15239 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NDUFA1O15239 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.13■□□□□ 0.33
NDUFA1O15239 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NDUFA1O15239 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NDUFA1O15239 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA1O15239 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
NDUFA1O15239 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.12■□□□□ 0.33
NDUFA1O15239 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFA1O15239 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.11■□□□□ 0.33
NDUFA1O15239 AL391121.1-201ENST00000607967 1349 ntBASIC17.11■□□□□ 0.33
NDUFA1O15239 AC145676.1-201ENST00000514988 2004 ntBASIC17.11■□□□□ 0.33
NDUFA1O15239 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 AC020928.2-201ENST00000588717 2197 ntBASIC17.1■□□□□ 0.33
NDUFA1O15239 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFA1O15239 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NDUFA1O15239 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFA1O15239 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDUFA1O15239 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFA1O15239 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.08■□□□□ 0.33
NDUFA1O15239 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA1O15239 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFA1O15239 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms