Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LST1O00453 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LST1O00453 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LST1O00453 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LST1O00453 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.59■□□□□ 0.25
LST1O00453 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LST1O00453 LINC01003-201ENST00000564834 1764 ntBASIC16.59■□□□□ 0.25
LST1O00453 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC16.58■□□□□ 0.25
LST1O00453 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LST1O00453 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LST1O00453 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LST1O00453 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LST1O00453 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LST1O00453 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LST1O00453 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LST1O00453 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LST1O00453 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LST1O00453 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LST1O00453 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LST1O00453 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LST1O00453 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LST1O00453 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LST1O00453 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LST1O00453 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LST1O00453 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.53■□□□□ 0.24
LST1O00453 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LST1O00453 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LST1O00453 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LST1O00453 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LST1O00453 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LST1O00453 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.52■□□□□ 0.23
LST1O00453 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LST1O00453 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LST1O00453 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LST1O00453 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LST1O00453 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
LST1O00453 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.51■□□□□ 0.23
LST1O00453 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LST1O00453 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
LST1O00453 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LST1O00453 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.51■□□□□ 0.23
LST1O00453 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LST1O00453 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LST1O00453 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LST1O00453 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.5■□□□□ 0.23
LST1O00453 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.49■□□□□ 0.23
LST1O00453 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LST1O00453 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.49■□□□□ 0.23
LST1O00453 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LST1O00453 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LST1O00453 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LST1O00453 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.49■□□□□ 0.23
LST1O00453 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LST1O00453 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LST1O00453 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LST1O00453 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LST1O00453 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC16.48■□□□□ 0.23
LST1O00453 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LST1O00453 AC133561.1-201ENST00000568600 2415 ntBASIC16.48■□□□□ 0.23
LST1O00453 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
LST1O00453 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LST1O00453 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LST1O00453 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
LST1O00453 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LST1O00453 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.47■□□□□ 0.23
LST1O00453 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LST1O00453 AC012676.1-201ENST00000574705 1949 ntBASIC16.47■□□□□ 0.23
LST1O00453 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LST1O00453 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LST1O00453 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LST1O00453 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LST1O00453 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LST1O00453 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LST1O00453 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LST1O00453 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LST1O00453 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LST1O00453 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
LST1O00453 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LST1O00453 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LST1O00453 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC16.45■□□□□ 0.22
LST1O00453 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LST1O00453 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LST1O00453 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.44■□□□□ 0.22
LST1O00453 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LST1O00453 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC16.44■□□□□ 0.22
LST1O00453 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LST1O00453 LINC00543-201ENST00000567234 1845 ntBASIC16.44■□□□□ 0.22
LST1O00453 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.44■□□□□ 0.22
LST1O00453 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms