Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM238LA0A1B0GVL6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM238LA0A1B0GVL6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM238LA0A1B0GVL6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM238LA0A1B0GVL6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM238LA0A1B0GVL6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM238LA0A1B0GVL6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM238LA0A1B0GVL6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM238LA0A1B0GVL6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM238LA0A1B0GVL6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM238LA0A1B0GVL6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM238LA0A1B0GVL6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM238LA0A1B0GVL6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM238LA0A1B0GVL6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM238LA0A1B0GVL6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM238LA0A1B0GVL6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.73■□□□□ 0.43
TMEM238LA0A1B0GVL6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM238LA0A1B0GVL6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TMEM238LA0A1B0GVL6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TMEM238LA0A1B0GVL6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM238LA0A1B0GVL6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM238LA0A1B0GVL6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM238LA0A1B0GVL6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM238LA0A1B0GVL6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM238LA0A1B0GVL6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TMEM238LA0A1B0GVL6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM238LA0A1B0GVL6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TMEM238LA0A1B0GVL6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM238LA0A1B0GVL6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM238LA0A1B0GVL6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM238LA0A1B0GVL6 AL158211.5-201ENST00000623583 2518 ntBASIC17.69■□□□□ 0.42
TMEM238LA0A1B0GVL6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM238LA0A1B0GVL6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM238LA0A1B0GVL6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM238LA0A1B0GVL6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM238LA0A1B0GVL6 AL139393.2-201ENST00000608721 2025 ntBASIC17.65■□□□□ 0.42
TMEM238LA0A1B0GVL6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.65■□□□□ 0.42
TMEM238LA0A1B0GVL6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TMEM238LA0A1B0GVL6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TMEM238LA0A1B0GVL6 BX255925.1-201ENST00000566954 1854 ntBASIC17.65■□□□□ 0.42
TMEM238LA0A1B0GVL6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM238LA0A1B0GVL6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.64■□□□□ 0.41
TMEM238LA0A1B0GVL6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM238LA0A1B0GVL6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.64■□□□□ 0.41
TMEM238LA0A1B0GVL6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TMEM238LA0A1B0GVL6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.63■□□□□ 0.41
TMEM238LA0A1B0GVL6 AL135925.1-201ENST00000605920 1701 ntBASIC17.63■□□□□ 0.41
TMEM238LA0A1B0GVL6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TMEM238LA0A1B0GVL6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM238LA0A1B0GVL6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TMEM238LA0A1B0GVL6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 AC093323.1-202ENST00000635031 2045 ntBASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TMEM238LA0A1B0GVL6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEM238LA0A1B0GVL6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM238LA0A1B0GVL6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TMEM238LA0A1B0GVL6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM238LA0A1B0GVL6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM238LA0A1B0GVL6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEM238LA0A1B0GVL6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 AL121603.2-201ENST00000557373 2117 ntBASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM238LA0A1B0GVL6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms