Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.63■■□□□ 1.37
TRBV11-1A0A0K0K1C0 ABCB10P3-201ENST00000561950 2166 ntBASIC23.63■■□□□ 1.37
TRBV11-1A0A0K0K1C0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.63■■□□□ 1.37
TRBV11-1A0A0K0K1C0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV11-1A0A0K0K1C0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV11-1A0A0K0K1C0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV11-1A0A0K0K1C0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TRBV11-1A0A0K0K1C0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 AC008813.1-201ENST00000536597 885 ntBASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.6■■□□□ 1.37
TRBV11-1A0A0K0K1C0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV11-1A0A0K0K1C0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
TRBV11-1A0A0K0K1C0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRBV11-1A0A0K0K1C0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.58■■□□□ 1.37
TRBV11-1A0A0K0K1C0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
TRBV11-1A0A0K0K1C0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRBV11-1A0A0K0K1C0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRBV11-1A0A0K0K1C0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRBV11-1A0A0K0K1C0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.57■■□□□ 1.36
TRBV11-1A0A0K0K1C0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBV11-1A0A0K0K1C0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TRBV11-1A0A0K0K1C0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRBV11-1A0A0K0K1C0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.56■■□□□ 1.36
TRBV11-1A0A0K0K1C0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.56■■□□□ 1.36
TRBV11-1A0A0K0K1C0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
TRBV11-1A0A0K0K1C0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV11-1A0A0K0K1C0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV11-1A0A0K0K1C0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 AC139426.1-201ENST00000568218 2529 ntBASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV11-1A0A0K0K1C0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV11-1A0A0K0K1C0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV11-1A0A0K0K1C0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.53■■□□□ 1.36
TRBV11-1A0A0K0K1C0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV11-1A0A0K0K1C0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TRBV11-1A0A0K0K1C0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRBV11-1A0A0K0K1C0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBV11-1A0A0K0K1C0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.51■■□□□ 1.35
TRBV11-1A0A0K0K1C0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.5■■□□□ 1.35
TRBV11-1A0A0K0K1C0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV11-1A0A0K0K1C0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
TRBV11-1A0A0K0K1C0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.49■■□□□ 1.35
TRBV11-1A0A0K0K1C0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TRBV11-1A0A0K0K1C0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.48■■□□□ 1.35
TRBV11-1A0A0K0K1C0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV11-1A0A0K0K1C0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV11-1A0A0K0K1C0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.46■■□□□ 1.35
TRBV11-1A0A0K0K1C0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV11-1A0A0K0K1C0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TRBV11-1A0A0K0K1C0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.45■■□□□ 1.35
TRBV11-1A0A0K0K1C0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
TRBV11-1A0A0K0K1C0 AC148477.6-201ENST00000623746 465 ntBASIC23.45■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.45■■□□□ 1.34
TRBV11-1A0A0K0K1C0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
TRBV11-1A0A0K0K1C0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV11-1A0A0K0K1C0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV11-1A0A0K0K1C0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV11-1A0A0K0K1C0 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.44■■□□□ 1.34
TRBV11-1A0A0K0K1C0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.43■■□□□ 1.34
TRBV11-1A0A0K0K1C0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms