Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 ABHD17AP4-201ENST00000411545 909 ntBASIC19.09■□□□□ 0.65
TRAV2A0A0B4J234 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV2A0A0B4J234 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRAV2A0A0B4J234 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV2A0A0B4J234 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV2A0A0B4J234 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV2A0A0B4J234 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV2A0A0B4J234 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV2A0A0B4J234 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 DRD5P2-201ENST00000421395 2012 ntBASIC19.07■□□□□ 0.64
TRAV2A0A0B4J234 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 AC142086.6-201ENST00000621154 1765 ntBASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV2A0A0B4J234 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV2A0A0B4J234 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L13-201ENST00000554103 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L15-201ENST00000611059 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L11-201ENST00000611504 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L12-201ENST00000614593 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L23-201ENST00000615195 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L24-201ENST00000617576 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L22-201ENST00000618238 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L20-201ENST00000619712 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L14-201ENST00000621227 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L21-201ENST00000622058 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L10-201ENST00000622460 1267 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 DUX4L25-201ENST00000624915 1269 ntBASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV2A0A0B4J234 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRAV2A0A0B4J234 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TRAV2A0A0B4J234 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRAV2A0A0B4J234 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV2A0A0B4J234 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV2A0A0B4J234 AC110285.7-201ENST00000624417 1536 ntBASIC19.02■□□□□ 0.64
TRAV2A0A0B4J234 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.02■□□□□ 0.64
TRAV2A0A0B4J234 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV2A0A0B4J234 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV2A0A0B4J234 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV2A0A0B4J234 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV2A0A0B4J234 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRAV2A0A0B4J234 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV2A0A0B4J234 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV2A0A0B4J234 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV2A0A0B4J234 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 AC018358.1-201ENST00000631079 1402 ntBASIC18.98■□□□□ 0.63
TRAV2A0A0B4J234 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV2A0A0B4J234 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRAV2A0A0B4J234 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 AC008813.1-201ENST00000536597 885 ntBASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV2A0A0B4J234 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms