Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RNF39Q9H2S5 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.34□□□□□ -1.23
RNF39Q9H2S5 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
RNF39Q9H2S5 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RNF39Q9H2S5 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.24
RNF39Q9H2S5 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RNU6-524P-201ENST00000384270 107 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RNU2-40P-201ENST00000410833 196 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RPL23AP82-202ENST00000427528 469 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RPL23AP7-203ENST00000449021 469 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 CENPBD1P1-201ENST00000464061 469 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 NDUFA4P2-201ENST00000489989 244 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 MIR2681-201ENST00000581814 105 ntBASIC7.33□□□□□ -1.24
RNF39Q9H2S5 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF39Q9H2S5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 RNU6-1094P-201ENST00000362416 104 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 RNA5SP321-201ENST00000362722 111 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 Y_RNA.430-201ENST00000384081 110 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 AC019205.3-201ENST00000424573 156 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 AL451050.1-201ENST00000450126 415 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 RN7SL369P-201ENST00000477138 299 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 OR9P1P-201ENST00000496431 281 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 AC091133.5-201ENST00000603088 301 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 AC012368.3-201ENST00000604190 219 ntBASIC7.32□□□□□ -1.24
RNF39Q9H2S5 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.32□□□□□ -1.24
RNF39Q9H2S5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 MFSD8-217ENST00000641178 4374 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 AC245291.3-201ENST00000443400 292 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 SNRPBP1-201ENST00000443634 282 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 RNU7-123P-201ENST00000515911 60 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 AC132068.1-201ENST00000623805 459 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 AL589993.1-201ENST00000407450 2524 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 BCLAF1P2-201ENST00000624956 2609 ntBASIC7.31□□□□□ -1.24
RNF39Q9H2S5 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
RNF39Q9H2S5 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
RNF39Q9H2S5 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.3□□□□□ -1.24
RNF39Q9H2S5 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.3□□□□□ -1.24
RNF39Q9H2S5 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms