RNA–Protein interactions for RNA: ENST00000367387.5

LHX9-201, Transcript of LIM homeobox 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LHX9, Length 7,836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-201ENST00000367387 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
LHX9-201ENST00000367387 PELP1Q8IZL8 1130 aaKnown RBP12.79□□□□□ -0.36
LHX9-201ENST00000367387 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
LHX9-201ENST00000367387 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
LHX9-201ENST00000367387 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
LHX9-201ENST00000367387 APLP2Q06481 763 aa12.24□□□□□ -0.45
LHX9-201ENST00000367387 CCER1Q8TC90 406 aaPredicted RBP12.23□□□□□ -0.45
LHX9-201ENST00000367387 FAM9AQ8IZU1 332 aaPredicted RBP12.14□□□□□ -0.47
LHX9-201ENST00000367387 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
LHX9-201ENST00000367387 MYT1Q01538 1121 aa12.03□□□□□ -0.48
LHX9-201ENST00000367387 CENPBP07199 599 aaPredicted RBP11.94□□□□□ -0.5
LHX9-201ENST00000367387 SHROOM4Q9ULL8 1493 aa11.92□□□□□ -0.5
LHX9-201ENST00000367387 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.51
LHX9-201ENST00000367387 NEFLP07196 543 aa11.88□□□□□ -0.51
LHX9-201ENST00000367387 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
LHX9-201ENST00000367387 RANGAP1P46060 587 aaPredicted RBP11.86□□□□□ -0.51
LHX9-201ENST00000367387 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
LHX9-201ENST00000367387 YTHDC1Q96MU7 727 aaKnown RBP11.73□□□□□ -0.53
LHX9-201ENST00000367387 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
LHX9-201ENST00000367387 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.56
LHX9-201ENST00000367387 ZEB1P37275 1124 aaPredicted RBP11.56□□□□□ -0.56
LHX9-201ENST00000367387 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
LHX9-201ENST00000367387 NISCHQ9Y2I1 1504 aa11.5□□□□□ -0.57
LHX9-201ENST00000367387 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
LHX9-201ENST00000367387 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
LHX9-201ENST00000367387 SLC4A1APQ9BWU0 796 aaKnown RBP11.47□□□□□ -0.57
LHX9-201ENST00000367387 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
LHX9-201ENST00000367387 CLSPNQ9HAW4 1339 aa11.45□□□□□ -0.58
LHX9-201ENST00000367387 RTL5Q5HYW3 569 aaPredicted RBP11.4□□□□□ -0.58
LHX9-201ENST00000367387 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
LHX9-201ENST00000367387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
LHX9-201ENST00000367387 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
LHX9-201ENST00000367387 PPARGC1BQ86YN6 1023 aaKnown RBP11.31□□□□□ -0.6
LHX9-201ENST00000367387 ITGAEP38570 1179 aa11.31□□□□□ -0.6
LHX9-201ENST00000367387 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
LHX9-201ENST00000367387 SLC24A1O60721 1099 aa11.21□□□□□ -0.62
LHX9-201ENST00000367387 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.62
LHX9-201ENST00000367387 HRCP23327 699 aa10.99□□□□□ -0.65
LHX9-201ENST00000367387 CANXP27824 592 aaKnown RBP10.99□□□□□ -0.65
LHX9-201ENST00000367387 BCANQ96GW7 911 aa10.98□□□□□ -0.65
LHX9-201ENST00000367387 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
LHX9-201ENST00000367387 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
LHX9-201ENST00000367387 CDK11AQ9UQ88 783 aaPredicted RBP10.94□□□□□ -0.66
LHX9-201ENST00000367387 NEFMP07197 916 aa10.93□□□□□ -0.66
LHX9-201ENST00000367387 ANP32BQ92688 251 aaKnown RBP10.92□□□□□ -0.66
LHX9-201ENST00000367387 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
LHX9-201ENST00000367387 ZNF326Q5BKZ1 582 aaKnown RBP10.9□□□□□ -0.66
LHX9-201ENST00000367387 FAM50AQ14320 339 aaKnown RBP10.87□□□□□ -0.67
LHX9-201ENST00000367387 HSP90AA1P07900 732 aaKnown RBP10.87□□□□□ -0.67
LHX9-201ENST00000367387 GLIPR1L2Q4G1C9 344 aa10.87□□□□□ -0.67
LHX9-201ENST00000367387 DIEXFQ68CQ4 756 aaKnown RBP10.86□□□□□ -0.67
LHX9-201ENST00000367387 NEUROD1Q13562 356 aa10.85□□□□□ -0.67
LHX9-201ENST00000367387 NPM2Q86SE8 214 aaKnown RBP10.84□□□□□ -0.67
LHX9-201ENST00000367387 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
LHX9-201ENST00000367387 ANP32AP39687 249 aaKnown RBP10.82□□□□□ -0.68
LHX9-201ENST00000367387 ANP32CO43423 234 aa10.8□□□□□ -0.68
LHX9-201ENST00000367387 ARXQ96QS3 562 aa10.73□□□□□ -0.69
LHX9-201ENST00000367387 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.7
LHX9-201ENST00000367387 PLPPR3Q6T4P5 718 aa10.71□□□□□ -0.7
LHX9-201ENST00000367387 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
LHX9-201ENST00000367387 LOC105371045A0A1W2PR82 267 aa10.69□□□□□ -0.7
LHX9-201ENST00000367387 A0A0G2JS52 829 aa10.68□□□□□ -0.7
LHX9-201ENST00000367387 TULP1O00294 542 aaPredicted RBP10.64□□□□□ -0.71
LHX9-201ENST00000367387 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
LHX9-201ENST00000367387 FBLN2P98095 1184 aa10.63□□□□□ -0.71
LHX9-201ENST00000367387 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
LHX9-201ENST00000367387 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
LHX9-201ENST00000367387 NBR1Q14596 966 aa10.58□□□□□ -0.72
LHX9-201ENST00000367387 CHGAP10645 457 aaKnown RBP10.57□□□□□ -0.72
LHX9-201ENST00000367387 NCBP3Q53F19 620 aaKnown RBP10.57□□□□□ -0.72
LHX9-201ENST00000367387 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
LHX9-201ENST00000367387 ARID3CA6NKF2 412 aa10.52□□□□□ -0.73
LHX9-201ENST00000367387 PLEKHG5O94827 1062 aa10.51□□□□□ -0.73
LHX9-201ENST00000367387 TNNT2P45379 298 aaPredicted RBP10.51□□□□□ -0.73
LHX9-201ENST00000367387 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.5□□□□□ -0.73
LHX9-201ENST00000367387 ZNF777Q9ULD5 760 aaPredicted RBP10.49□□□□□ -0.73
LHX9-201ENST00000367387 FKBP8Q14318 412 aa10.48□□□□□ -0.73
LHX9-201ENST00000367387 TRIM44Q96DX7 344 aaPredicted RBP10.48□□□□□ -0.73
LHX9-201ENST00000367387 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
LHX9-201ENST00000367387 ZRSR1Q15695 479 aaKnown RBP10.47□□□□□ -0.73
LHX9-201ENST00000367387 MYH16Q9H6N6 1097 aa10.46□□□□□ -0.74
LHX9-201ENST00000367387 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
LHX9-201ENST00000367387 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
LHX9-201ENST00000367387 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
LHX9-201ENST00000367387 DNTTIP2Q5QJE6 756 aaKnown RBP10.44□□□□□ -0.74
LHX9-201ENST00000367387 CCDC136Q96JN2 1154 aa10.43□□□□□ -0.74
LHX9-201ENST00000367387 HNRNPUQ00839 825 aaKnown RBP eCLIP10.43□□□□□ -0.74
LHX9-201ENST00000367387 PTMAP06454 111 aaKnown RBP10.42□□□□□ -0.74
LHX9-201ENST00000367387 TAOK2Q9UL54 1235 aa10.41□□□□□ -0.74
LHX9-201ENST00000367387 C14orf37Q86TY3 774 aa10.4□□□□□ -0.74
LHX9-201ENST00000367387 P3H3Q8IVL6 736 aa10.39□□□□□ -0.75
LHX9-201ENST00000367387 WDR43Q15061 677 aaKnown RBP eCLIP10.39□□□□□ -0.75
LHX9-201ENST00000367387 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
LHX9-201ENST00000367387 GOLGA6L22H0YM25 854 aa10.37□□□□□ -0.75
LHX9-201ENST00000367387 CLSTN1O94985 981 aa10.35□□□□□ -0.75
LHX9-201ENST00000367387 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
LHX9-201ENST00000367387 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
LHX9-201ENST00000367387 NPHP1O15259 732 aa10.34□□□□□ -0.75
LHX9-201ENST00000367387 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
LHX9-201ENST00000367387 ACIN1Q9UKV3 1341 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms