RNA–Protein interactions for RNA: ENST00000410833.1

RNU2-40P-201, Transcript of RNA, U2 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU2-40P, Length 196 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-40P-201ENST00000410833 AEBP2Q6ZN18 517 aaPredicted RBP11.27□□□□□ -0.61
RNU2-40P-201ENST00000410833 CHIC1Q5VXU3 224 aa10.48□□□□□ -0.73
RNU2-40P-201ENST00000410833 SENP3Q9H4L4 574 aaPredicted RBP9.64□□□□□ -0.87
RNU2-40P-201ENST00000410833 PHF23Q9BUL5 403 aaPredicted RBP9.48□□□□□ -0.89
RNU2-40P-201ENST00000410833 POTEDQ86YR6 584 aa9.21□□□□□ -0.94
RNU2-40P-201ENST00000410833 FOXD1Q16676 465 aa9.07□□□□□ -0.96
RNU2-40P-201ENST00000410833 MSH5O43196 834 aa8.62□□□□□ -1.03
RNU2-40P-201ENST00000410833 PIAS4Q8N2W9 510 aaPredicted RBP8.37□□□□□ -1.07
RNU2-40P-201ENST00000410833 PPP6R1Q9UPN7 881 aa8.16□□□□□ -1.1
RNU2-40P-201ENST00000410833 ADRA2BP18089 450 aa8.11□□□□□ -1.11
RNU2-40P-201ENST00000410833 PLPPR3Q6T4P5 718 aa7.97□□□□□ -1.13
RNU2-40P-201ENST00000410833 CACNB1Q02641 598 aaPredicted RBP7.71□□□□□ -1.18
RNU2-40P-201ENST00000410833 MAPK8IP2Q13387 824 aaPredicted RBP7.6□□□□□ -1.19
RNU2-40P-201ENST00000410833 DMRT2Q9Y5R5 561 aa7.58□□□□□ -1.2
RNU2-40P-201ENST00000410833 SCAF1Q9H7N4 1312 aaKnown RBP7.36□□□□□ -1.23
RNU2-40P-201ENST00000410833 DCAF8L1A6NGE4 600 aa7.34□□□□□ -1.23
RNU2-40P-201ENST00000410833 RNF39Q9H2S5 420 aa7.33□□□□□ -1.24
RNU2-40P-201ENST00000410833 C1QBPQ07021 282 aaKnown RBP7.18□□□□□ -1.26
RNU2-40P-201ENST00000410833 POTEHQ6S545 545 aa7.13□□□□□ -1.27
RNU2-40P-201ENST00000410833 HOXD11P31277 338 aaPredicted RBP7.12□□□□□ -1.27
RNU2-40P-201ENST00000410833 PPP4R3CPQ6ZMV5 832 aa6.95□□□□□ -1.3
RNU2-40P-201ENST00000410833 RNF216Q9NWF9 866 aaPredicted RBP6.95□□□□□ -1.3
RNU2-40P-201ENST00000410833 DNAJC5BQ9UF47 199 aa6.92□□□□□ -1.3
RNU2-40P-201ENST00000410833 CNKSR2Q8WXI2 1034 aa6.9□□□□□ -1.3
RNU2-40P-201ENST00000410833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU2-40P-201ENST00000410833 DSG3P32926 999 aa6.72□□□□□ -1.33
RNU2-40P-201ENST00000410833 CAPN15O75808 1086 aa6.67□□□□□ -1.34
RNU2-40P-201ENST00000410833 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
RNU2-40P-201ENST00000410833 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
RNU2-40P-201ENST00000410833 NCBP3Q53F19 620 aaKnown RBP6.51□□□□□ -1.37
RNU2-40P-201ENST00000410833 ABCB7O75027 752 aa6.5□□□□□ -1.37
RNU2-40P-201ENST00000410833 TRHP20396 242 aaPredicted RBP6.47□□□□□ -1.37
RNU2-40P-201ENST00000410833 CHRDL2Q6WN34 429 aa6.46□□□□□ -1.38
RNU2-40P-201ENST00000410833 SP7Q8TDD2 431 aaPredicted RBP6.46□□□□□ -1.38
RNU2-40P-201ENST00000410833 NPM3O75607 178 aaKnown RBP6.45□□□□□ -1.38
RNU2-40P-201ENST00000410833 RBM42Q9BTD8 480 aaKnown RBP6.4□□□□□ -1.38
RNU2-40P-201ENST00000410833 ZNF219Q9P2Y4 722 aaPredicted RBP6.39□□□□□ -1.39
RNU2-40P-201ENST00000410833 APLP2Q06481 763 aa6.33□□□□□ -1.4
RNU2-40P-201ENST00000410833 SLC4A2P04920 1241 aa6.28□□□□□ -1.4
RNU2-40P-201ENST00000410833 HAX1O00165 279 aa6.24□□□□□ -1.41
RNU2-40P-201ENST00000410833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.23□□□□□ -1.41
RNU2-40P-201ENST00000410833 HNRNPUL2Q1KMD3 747 aaKnown RBP6.23□□□□□ -1.41
RNU2-40P-201ENST00000410833 PIP4P2Q8N4L2 257 aa6.22□□□□□ -1.41
RNU2-40P-201ENST00000410833 POLA2Q14181 598 aa6.18□□□□□ -1.42
RNU2-40P-201ENST00000410833 SAMD1Q6SPF0 538 aaPredicted RBP6.18□□□□□ -1.42
RNU2-40P-201ENST00000410833 AKT1S1Q96B36 256 aa6.16□□□□□ -1.42
RNU2-40P-201ENST00000410833 EVX2Q03828 476 aa6.14□□□□□ -1.43
RNU2-40P-201ENST00000410833 REM2Q8IYK8 340 aaPredicted RBP6.13□□□□□ -1.43
RNU2-40P-201ENST00000410833 FXR2P51116 673 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU2-40P-201ENST00000410833 PITPNM1O00562 1244 aa6.08□□□□□ -1.44
RNU2-40P-201ENST00000410833 PLSCR2Q9NRY7 297 aa6.08□□□□□ -1.44
RNU2-40P-201ENST00000410833 LHX8Q68G74 356 aa6.07□□□□□ -1.44
RNU2-40P-201ENST00000410833 OSCARQ8IYS5 282 aa6.01□□□□□ -1.45
RNU2-40P-201ENST00000410833 ZBTB12Q9Y330 459 aaPredicted RBP5.97□□□□□ -1.45
RNU2-40P-201ENST00000410833 GABBR2O75899 941 aa5.96□□□□□ -1.46
RNU2-40P-201ENST00000410833 MYCNP04198 464 aaPredicted RBP5.95□□□□□ -1.46
RNU2-40P-201ENST00000410833 KCNA4P22459 653 aa5.94□□□□□ -1.46
RNU2-40P-201ENST00000410833 C19orf67A6NJJ6 358 aa5.92□□□□□ -1.46
RNU2-40P-201ENST00000410833 PRKAR2AP13861 404 aaKnown RBP5.92□□□□□ -1.46
RNU2-40P-201ENST00000410833 ATF5Q9Y2D1 282 aaPredicted RBP5.9□□□□□ -1.46
RNU2-40P-201ENST00000410833 POTEIP0CG38 1075 aa5.84□□□□□ -1.47
RNU2-40P-201ENST00000410833 CLEC11AQ9Y240 323 aa5.83□□□□□ -1.48
RNU2-40P-201ENST00000410833 CHADLQ6NUI6 762 aa5.78□□□□□ -1.48
RNU2-40P-201ENST00000410833 SPDYE1Q8NFV5 336 aaPredicted RBP5.78□□□□□ -1.48
RNU2-40P-201ENST00000410833 SPDYE2BA6NHP3 402 aa5.77□□□□□ -1.49
RNU2-40P-201ENST00000410833 SPDYE6P0CI01 402 aa5.77□□□□□ -1.49
RNU2-40P-201ENST00000410833 SPDYE2Q495Y8 402 aa5.77□□□□□ -1.49
RNU2-40P-201ENST00000410833 POTEMA6NI47 508 aa5.74□□□□□ -1.49
RNU2-40P-201ENST00000410833 POTEGQ6S5H5 508 aa5.71□□□□□ -1.5
RNU2-40P-201ENST00000410833 CD44P16070 742 aaKnown RBP5.7□□□□□ -1.5
RNU2-40P-201ENST00000410833 OTUD5Q96G74 571 aa5.7□□□□□ -1.5
RNU2-40P-201ENST00000410833 DCBLD2Q96PD2 775 aa5.7□□□□□ -1.5
RNU2-40P-201ENST00000410833 FBLN2P98095 1184 aa5.66□□□□□ -1.5
RNU2-40P-201ENST00000410833 PRR29P0C7W0 189 aa5.65□□□□□ -1.5
RNU2-40P-201ENST00000410833 CLCN6P51797 869 aa5.65□□□□□ -1.5
RNU2-40P-201ENST00000410833 ZNF692Q9BU19 519 aaPredicted RBP5.65□□□□□ -1.5
RNU2-40P-201ENST00000410833 FOXD4L1Q9NU39 408 aa5.65□□□□□ -1.5
RNU2-40P-201ENST00000410833 POTEB2H3BUK9 544 aa5.64□□□□□ -1.51
RNU2-40P-201ENST00000410833 SSUH2Q9Y2M2 353 aa5.64□□□□□ -1.51
RNU2-40P-201ENST00000410833 PCDH10Q9P2E7 1040 aa5.62□□□□□ -1.51
RNU2-40P-201ENST00000410833 FARP1Q9Y4F1 1045 aaPredicted RBP5.62□□□□□ -1.51
RNU2-40P-201ENST00000410833 MKRN4PQ13434 485 aaPredicted RBP5.59□□□□□ -1.51
RNU2-40P-201ENST00000410833 GALR2O43603 387 aaPredicted RBP5.57□□□□□ -1.52
RNU2-40P-201ENST00000410833 ZNF579Q8NAF0 562 aaKnown RBP5.57□□□□□ -1.52
RNU2-40P-201ENST00000410833 PABPN1Q86U42 306 aaKnown RBP eCLIP5.56□□□□□ -1.52
RNU2-40P-201ENST00000410833 ZRANB1Q9UGI0 708 aa5.56□□□□□ -1.52
RNU2-40P-201ENST00000410833 LCE2DQ5TA82 110 aaPredicted RBP5.52□□□□□ -1.53
RNU2-40P-201ENST00000410833 PELP1Q8IZL8 1130 aaKnown RBP5.51□□□□□ -1.53
RNU2-40P-201ENST00000410833 SLC4A1APQ9BWU0 796 aaKnown RBP5.51□□□□□ -1.53
RNU2-40P-201ENST00000410833 ATXN8OSP0DMR3 200 aa5.5□□□□□ -1.53
RNU2-40P-201ENST00000410833 FAM163AQ96GL9 167 aaPredicted RBP5.5□□□□□ -1.53
RNU2-40P-201ENST00000410833 POTEJP0CG39 1038 aa5.49□□□□□ -1.53
RNU2-40P-201ENST00000410833 ZBTB22O15209 634 aa5.46□□□□□ -1.54
RNU2-40P-201ENST00000410833 PHF12Q96QT6 1004 aa5.46□□□□□ -1.54
RNU2-40P-201ENST00000410833 METRNQ9UJH8 293 aa5.46□□□□□ -1.54
RNU2-40P-201ENST00000410833 MAMSTRQ6ZN01 415 aa5.43□□□□□ -1.54
RNU2-40P-201ENST00000410833 CDAN1Q8IWY9 1227 aa5.42□□□□□ -1.54
RNU2-40P-201ENST00000410833 CREBZFQ9NS37 354 aa5.41□□□□□ -1.54
RNU2-40P-201ENST00000410833 C7P10643 843 aa5.4□□□□□ -1.54
RNU2-40P-201ENST00000410833 PAK3O75914 559 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 200.3 ms