Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 PPP6R3-218ENST00000529710 3228 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 OLMALINC-203ENST00000641087 3779 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-1079P-201ENST00000362861 110 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNA5SP452-201ENST00000363004 119 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 LY6G6E-225ENST00000383418 383 ntAPPRIS P5 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNA5SP292-201ENST00000390974 118 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-447P-201ENST00000410293 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-1118P-201ENST00000410382 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-1076P-201ENST00000410397 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-355P-201ENST00000410427 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SKP202-201ENST00000410439 330 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-791P-201ENST00000410467 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-705P-201ENST00000410601 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-1100P-201ENST00000410691 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-860P-201ENST00000410860 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-1217P-201ENST00000411276 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RNU6-785P-201ENST00000411324 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 HSPE1P12-201ENST00000412576 301 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RPL36P2-201ENST00000426026 315 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 IGKV1D-35-201ENST00000442736 271 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 MYL6P1-201ENST00000449877 453 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC112771.1-201ENST00000463581 102 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL35P-201ENST00000466169 292 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 RN7SL41P-201ENST00000476144 297 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC068531.1-201ENST00000502398 195 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC027688.1-201ENST00000568471 584 ntTSL 4 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 MIR3918-201ENST00000581555 93 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 PDLIM1P3-201ENST00000582370 599 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 CD160-204ENST00000584442 219 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 U6.90-201ENST00000614007 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 U6.70-201ENST00000620287 104 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 U6.108-201ENST00000637764 58 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 HK1-203ENST00000360289 3961 ntTSL 5 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 AC010886.1-201ENST00000437380 2869 ntBASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
KRTAP3-3Q9BYR6 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 AC016582.1-202ENST00000636341 2982 ntBASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 AL356489.2-201ENST00000566968 3528 ntBASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 AP003122.5-201ENST00000527668 3766 ntBASIC4.15□□□□□ -1.74
KRTAP3-3Q9BYR6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 RNA5SP74-201ENST00000363538 109 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 Y_RNA.494-201ENST00000384432 111 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 AC009228.1-201ENST00000413254 240 ntTSL 2 BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 AL139247.1-201ENST00000422768 325 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 FTLP2-201ENST00000431458 528 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 AC006463.1-201ENST00000445929 232 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 AC017104.1-203ENST00000454416 466 ntTSL 3 BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 DCD-202ENST00000456047 670 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL318P-201ENST00000471955 297 ntBASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 PAX8-211ENST00000497038 816 ntTSL 5 BASIC4.15□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL62P-201ENST00000498506 297 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms