Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NOBOXO60393 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
NOBOXO60393 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 DHX9P1-201ENST00000436565 3076 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 NEAT1-202ENST00000501122 22743 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 TLK1P1-201ENST00000456760 2440 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
NOBOXO60393 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOBOXO60393 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOBOXO60393 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOBOXO60393 RNU6-38P-201ENST00000384085 107 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 RNU6-1013P-201ENST00000384180 107 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 ARF4P3-201ENST00000397387 509 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 MIR548F4-201ENST00000408515 105 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AC114482.1-201ENST00000418010 247 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 RPL23AP1-201ENST00000428990 471 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 RPS17P8-201ENST00000434525 335 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 RNU6-333P-201ENST00000459117 107 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AC108751.2-201ENST00000469993 231 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.66□□□□□ -1.66
NOBOXO60393 AC106872.2-201ENST00000494303 480 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 AC108471.1-201ENST00000513977 287 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 Y_RNA.682-201ENST00000516457 100 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AF186190.1-201ENST00000517470 480 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 MIR4277-201ENST00000578298 84 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 SNORA74C-1-201ENST00000580726 201 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.66□□□□□ -1.66
NOBOXO60393 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 U4.1-201ENST00000620349 87 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 AC139713.2-214ENST00000642059 1811 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NOBOXO60393 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.66□□□□□ -1.66
NOBOXO60393 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
NOBOXO60393 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
NOBOXO60393 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.66□□□□□ -1.66
NOBOXO60393 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.65□□□□□ -1.66
NOBOXO60393 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
NOBOXO60393 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NOBOXO60393 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
NOBOXO60393 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NOBOXO60393 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NOBOXO60393 RNU4-66P-201ENST00000365199 138 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC117470.1-201ENST00000381974 330 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AL592291.1-201ENST00000403830 352 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 MIR548F5-201ENST00000408421 86 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RNU6-370P-201ENST00000411008 104 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AL590609.2-201ENST00000421430 368 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC137499.1-201ENST00000427602 88 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RPS20P5-201ENST00000434808 360 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 MRPL48P1-201ENST00000445390 636 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC107399.1-201ENST00000451226 265 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.65□□□□□ -1.67
NOBOXO60393 CECR9-201ENST00000453421 199 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AL445433.1-201ENST00000457507 257 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 RN7SKP122-201ENST00000515923 296 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RNU6-864P-201ENST00000516256 108 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RNU1-6P-201ENST00000516290 144 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 SNORD27.1-201ENST00000516319 72 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RNU6-709P-201ENST00000517257 104 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.65□□□□□ -1.67
NOBOXO60393 AP003497.1-201ENST00000528472 562 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NOBOXO60393 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.65□□□□□ -1.67
NOBOXO60393 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC008269.2-201ENST00000561915 1105 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 MIR3146-201ENST00000580367 79 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 AL353997.4-201ENST00000586196 166 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 AL008729.2-201ENST00000606393 473 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 AC005014.2-201ENST00000607795 599 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 RMST_9.1-201ENST00000619945 193 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 MIR6830-201ENST00000636015 70 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 OR52H1-202ENST00000641796 1061 ntBASIC4.65□□□□□ -1.67
NOBOXO60393 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOBOXO60393 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOBOXO60393 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.65□□□□□ -1.67
NOBOXO60393 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOBOXO60393 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.65□□□□□ -1.67
NOBOXO60393 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NOBOXO60393 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms