RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
AC004053.1-201ENST00000515127 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
AC004053.1-201ENST00000515127 SENP3Q9H4L4 574 aaPredicted RBP17.85■□□□□ 0.45
AC004053.1-201ENST00000515127 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
AC004053.1-201ENST00000515127 FOXD1Q16676 465 aa16.66■□□□□ 0.26
AC004053.1-201ENST00000515127 MSH5O43196 834 aa15.68■□□□□ 0.1
AC004053.1-201ENST00000515127 PLPPR3Q6T4P5 718 aa15.65■□□□□ 0.1
AC004053.1-201ENST00000515127 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
AC004053.1-201ENST00000515127 PIAS4Q8N2W9 510 aaPredicted RBP15.57■□□□□ 0.08
AC004053.1-201ENST00000515127 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
AC004053.1-201ENST00000515127 ADRA2BP18089 450 aa15.42■□□□□ 0.06
AC004053.1-201ENST00000515127 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
AC004053.1-201ENST00000515127 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.15
AC004053.1-201ENST00000515127 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
AC004053.1-201ENST00000515127 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
AC004053.1-201ENST00000515127 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
AC004053.1-201ENST00000515127 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
AC004053.1-201ENST00000515127 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
AC004053.1-201ENST00000515127 CNKSR2Q8WXI2 1034 aa13.48□□□□□ -0.25
AC004053.1-201ENST00000515127 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
AC004053.1-201ENST00000515127 RNF39Q9H2S5 420 aa13.31□□□□□ -0.28
AC004053.1-201ENST00000515127 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
AC004053.1-201ENST00000515127 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
AC004053.1-201ENST00000515127 DNAJC5BQ9UF47 199 aa13.02□□□□□ -0.33
AC004053.1-201ENST00000515127 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
AC004053.1-201ENST00000515127 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
AC004053.1-201ENST00000515127 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
AC004053.1-201ENST00000515127 CAPN15O75808 1086 aa12.57□□□□□ -0.4
AC004053.1-201ENST00000515127 KCNA4P22459 653 aa12.51□□□□□ -0.41
AC004053.1-201ENST00000515127 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
AC004053.1-201ENST00000515127 DSG3P32926 999 aa12.43□□□□□ -0.42
AC004053.1-201ENST00000515127 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
AC004053.1-201ENST00000515127 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
AC004053.1-201ENST00000515127 APLP2Q06481 763 aa12.3□□□□□ -0.44
AC004053.1-201ENST00000515127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.23□□□□□ -0.45
AC004053.1-201ENST00000515127 ABCB7O75027 752 aa12.23□□□□□ -0.45
AC004053.1-201ENST00000515127 HNRNPUL2Q1KMD3 747 aaKnown RBP12.23□□□□□ -0.45
AC004053.1-201ENST00000515127 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
AC004053.1-201ENST00000515127 POTEHQ6S545 545 aa12.2□□□□□ -0.46
AC004053.1-201ENST00000515127 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
AC004053.1-201ENST00000515127 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
AC004053.1-201ENST00000515127 POLA2Q14181 598 aa11.92□□□□□ -0.5
AC004053.1-201ENST00000515127 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
AC004053.1-201ENST00000515127 SLC4A1APQ9BWU0 796 aaKnown RBP11.81□□□□□ -0.52
AC004053.1-201ENST00000515127 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
AC004053.1-201ENST00000515127 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
AC004053.1-201ENST00000515127 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
AC004053.1-201ENST00000515127 ZBTB12Q9Y330 459 aaPredicted RBP11.63□□□□□ -0.55
AC004053.1-201ENST00000515127 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
AC004053.1-201ENST00000515127 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
AC004053.1-201ENST00000515127 REM2Q8IYK8 340 aaPredicted RBP11.48□□□□□ -0.57
AC004053.1-201ENST00000515127 ZBTB22O15209 634 aa11.44□□□□□ -0.58
AC004053.1-201ENST00000515127 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
AC004053.1-201ENST00000515127 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
AC004053.1-201ENST00000515127 PITPNM1O00562 1244 aa11.34□□□□□ -0.59
AC004053.1-201ENST00000515127 SP7Q8TDD2 431 aaPredicted RBP11.34□□□□□ -0.59
AC004053.1-201ENST00000515127 FBLN2P98095 1184 aa11.32□□□□□ -0.6
AC004053.1-201ENST00000515127 HAX1O00165 279 aa11.31□□□□□ -0.6
AC004053.1-201ENST00000515127 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
AC004053.1-201ENST00000515127 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
AC004053.1-201ENST00000515127 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
AC004053.1-201ENST00000515127 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
AC004053.1-201ENST00000515127 EHMT2Q96KQ7 1210 aa11.21□□□□□ -0.61
AC004053.1-201ENST00000515127 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
AC004053.1-201ENST00000515127 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
AC004053.1-201ENST00000515127 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
AC004053.1-201ENST00000515127 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
AC004053.1-201ENST00000515127 MKRN4PQ13434 485 aaPredicted RBP11.11□□□□□ -0.63
AC004053.1-201ENST00000515127 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
AC004053.1-201ENST00000515127 EVX2Q03828 476 aa11.07□□□□□ -0.64
AC004053.1-201ENST00000515127 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
AC004053.1-201ENST00000515127 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
AC004053.1-201ENST00000515127 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
AC004053.1-201ENST00000515127 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
AC004053.1-201ENST00000515127 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
AC004053.1-201ENST00000515127 GABBR2O75899 941 aa10.83□□□□□ -0.68
AC004053.1-201ENST00000515127 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
AC004053.1-201ENST00000515127 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
AC004053.1-201ENST00000515127 LHX8Q68G74 356 aa10.69□□□□□ -0.7
AC004053.1-201ENST00000515127 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
AC004053.1-201ENST00000515127 CLCN6P51797 869 aa10.59□□□□□ -0.71
AC004053.1-201ENST00000515127 ZRANB1Q9UGI0 708 aa10.58□□□□□ -0.72
AC004053.1-201ENST00000515127 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
AC004053.1-201ENST00000515127 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
AC004053.1-201ENST00000515127 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
AC004053.1-201ENST00000515127 CREBZFQ9NS37 354 aa10.55□□□□□ -0.72
AC004053.1-201ENST00000515127 ZNF579Q8NAF0 562 aaKnown RBP10.49□□□□□ -0.73
AC004053.1-201ENST00000515127 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
AC004053.1-201ENST00000515127 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
AC004053.1-201ENST00000515127 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
AC004053.1-201ENST00000515127 PHF12Q96QT6 1004 aa10.38□□□□□ -0.75
AC004053.1-201ENST00000515127 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
AC004053.1-201ENST00000515127 TSPYL2Q9H2G4 693 aaPredicted RBP10.26□□□□□ -0.77
AC004053.1-201ENST00000515127 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
AC004053.1-201ENST00000515127 OTUD5Q96G74 571 aa10.22□□□□□ -0.77
AC004053.1-201ENST00000515127 POTEB2H3BUK9 544 aa10.21□□□□□ -0.77
AC004053.1-201ENST00000515127 MS4A3Q96HJ5 214 aa10.21□□□□□ -0.77
AC004053.1-201ENST00000515127 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.77
AC004053.1-201ENST00000515127 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
AC004053.1-201ENST00000515127 MIER1Q8N108 512 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms