RNA–Protein interactions for RNA: ENST00000620349.1

U4.1-201, humanhuman

BASIC

Gene U4, Length 87 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U4.1-201ENST00000620349 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
U4.1-201ENST00000620349 CHIC1Q5VXU3 224 aa20.49■□□□□ 0.87
U4.1-201ENST00000620349 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
U4.1-201ENST00000620349 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
U4.1-201ENST00000620349 FOXD1Q16676 465 aa17.49■□□□□ 0.39
U4.1-201ENST00000620349 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
U4.1-201ENST00000620349 MSH5O43196 834 aa16.42■□□□□ 0.22
U4.1-201ENST00000620349 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
U4.1-201ENST00000620349 PLPPR3Q6T4P5 718 aa16.21■□□□□ 0.19
U4.1-201ENST00000620349 PPP6R1Q9UPN7 881 aa16.17■□□□□ 0.18
U4.1-201ENST00000620349 ADRA2BP18089 450 aa16.08■□□□□ 0.16
U4.1-201ENST00000620349 MAPK8IP2Q13387 824 aaPredicted RBP14.88□□□□□ -0.03
U4.1-201ENST00000620349 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
U4.1-201ENST00000620349 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
U4.1-201ENST00000620349 CACNB1Q02641 598 aaPredicted RBP14.28□□□□□ -0.12
U4.1-201ENST00000620349 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
U4.1-201ENST00000620349 DCAF8L1A6NGE4 600 aa14.16□□□□□ -0.14
U4.1-201ENST00000620349 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
U4.1-201ENST00000620349 RNF39Q9H2S5 420 aa14.03□□□□□ -0.16
U4.1-201ENST00000620349 CNKSR2Q8WXI2 1034 aa13.98□□□□□ -0.17
U4.1-201ENST00000620349 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
U4.1-201ENST00000620349 C1QBPQ07021 282 aaKnown RBP13.78□□□□□ -0.2
U4.1-201ENST00000620349 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
U4.1-201ENST00000620349 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
U4.1-201ENST00000620349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
U4.1-201ENST00000620349 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
U4.1-201ENST00000620349 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
U4.1-201ENST00000620349 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
U4.1-201ENST00000620349 DSG3P32926 999 aa13.05□□□□□ -0.32
U4.1-201ENST00000620349 CAPN15O75808 1086 aa13.01□□□□□ -0.33
U4.1-201ENST00000620349 POTEHQ6S545 545 aa12.92□□□□□ -0.34
U4.1-201ENST00000620349 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
U4.1-201ENST00000620349 KCNA4P22459 653 aa12.87□□□□□ -0.35
U4.1-201ENST00000620349 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
U4.1-201ENST00000620349 ABCB7O75027 752 aa12.7□□□□□ -0.38
U4.1-201ENST00000620349 ZNF219Q9P2Y4 722 aaPredicted RBP12.67□□□□□ -0.38
U4.1-201ENST00000620349 APLP2Q06481 763 aa12.65□□□□□ -0.38
U4.1-201ENST00000620349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.6□□□□□ -0.39
U4.1-201ENST00000620349 HNRNPUL2Q1KMD3 747 aaKnown RBP12.6□□□□□ -0.39
U4.1-201ENST00000620349 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
U4.1-201ENST00000620349 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
U4.1-201ENST00000620349 POLA2Q14181 598 aa12.35□□□□□ -0.43
U4.1-201ENST00000620349 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
U4.1-201ENST00000620349 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
U4.1-201ENST00000620349 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
U4.1-201ENST00000620349 AKT1S1Q96B36 256 aa12.07□□□□□ -0.48
U4.1-201ENST00000620349 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
U4.1-201ENST00000620349 FOXD4L1Q9NU39 408 aa12.06□□□□□ -0.48
U4.1-201ENST00000620349 ZBTB12Q9Y330 459 aaPredicted RBP12.01□□□□□ -0.49
U4.1-201ENST00000620349 REM2Q8IYK8 340 aaPredicted RBP11.99□□□□□ -0.49
U4.1-201ENST00000620349 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
U4.1-201ENST00000620349 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
U4.1-201ENST00000620349 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
U4.1-201ENST00000620349 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
U4.1-201ENST00000620349 ZBTB22O15209 634 aa11.86□□□□□ -0.51
U4.1-201ENST00000620349 FXR2P51116 673 aaKnown RBP eCLIP11.82□□□□□ -0.52
U4.1-201ENST00000620349 HAX1O00165 279 aa11.77□□□□□ -0.53
U4.1-201ENST00000620349 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
U4.1-201ENST00000620349 EVX2Q03828 476 aa11.69□□□□□ -0.54
U4.1-201ENST00000620349 SPDYE2BA6NHP3 402 aa11.64□□□□□ -0.55
U4.1-201ENST00000620349 SPDYE6P0CI01 402 aa11.64□□□□□ -0.55
U4.1-201ENST00000620349 SPDYE2Q495Y8 402 aa11.64□□□□□ -0.55
U4.1-201ENST00000620349 FBLN2P98095 1184 aa11.6□□□□□ -0.55
U4.1-201ENST00000620349 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
U4.1-201ENST00000620349 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
U4.1-201ENST00000620349 SPDYE1Q8NFV5 336 aaPredicted RBP11.51□□□□□ -0.57
U4.1-201ENST00000620349 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
U4.1-201ENST00000620349 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
U4.1-201ENST00000620349 ZNF692Q9BU19 519 aaPredicted RBP11.48□□□□□ -0.57
U4.1-201ENST00000620349 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
U4.1-201ENST00000620349 GABBR2O75899 941 aa11.36□□□□□ -0.59
U4.1-201ENST00000620349 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
U4.1-201ENST00000620349 PABPN1Q86U42 306 aaKnown RBP eCLIP11.3□□□□□ -0.6
U4.1-201ENST00000620349 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
U4.1-201ENST00000620349 LHX8Q68G74 356 aa11.23□□□□□ -0.61
U4.1-201ENST00000620349 POTEIP0CG38 1075 aa11.15□□□□□ -0.62
U4.1-201ENST00000620349 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
U4.1-201ENST00000620349 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
U4.1-201ENST00000620349 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
U4.1-201ENST00000620349 CLCN6P51797 869 aa11.01□□□□□ -0.65
U4.1-201ENST00000620349 CREBZFQ9NS37 354 aa10.98□□□□□ -0.65
U4.1-201ENST00000620349 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
U4.1-201ENST00000620349 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
U4.1-201ENST00000620349 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
U4.1-201ENST00000620349 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
U4.1-201ENST00000620349 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
U4.1-201ENST00000620349 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
U4.1-201ENST00000620349 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
U4.1-201ENST00000620349 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
U4.1-201ENST00000620349 OTUD5Q96G74 571 aa10.78□□□□□ -0.68
U4.1-201ENST00000620349 MNX1P50219 401 aaPredicted RBP10.77□□□□□ -0.69
U4.1-201ENST00000620349 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
U4.1-201ENST00000620349 PELP1Q8IZL8 1130 aaKnown RBP10.72□□□□□ -0.69
U4.1-201ENST00000620349 PLSCR2Q9NRY7 297 aa10.71□□□□□ -0.69
U4.1-201ENST00000620349 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
U4.1-201ENST00000620349 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
U4.1-201ENST00000620349 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
U4.1-201ENST00000620349 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
U4.1-201ENST00000620349 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
U4.1-201ENST00000620349 POTEJP0CG39 1038 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms