RNA–Protein interactions for RNA: ENST00000365199.1

RNU4-66P-201, Transcript of RNA, U4 small nuclear 66, pseudogene, humanhuman

BASIC

Gene RNU4-66P, Length 138 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-66P-201ENST00000365199 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
RNU4-66P-201ENST00000365199 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
RNU4-66P-201ENST00000365199 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
RNU4-66P-201ENST00000365199 SENP3Q9H4L4 574 aaPredicted RBP15.68■□□□□ 0.1
RNU4-66P-201ENST00000365199 FOXD1Q16676 465 aa14.52□□□□□ -0.09
RNU4-66P-201ENST00000365199 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
RNU4-66P-201ENST00000365199 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
RNU4-66P-201ENST00000365199 ADRA2BP18089 450 aa13.82□□□□□ -0.2
RNU4-66P-201ENST00000365199 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
RNU4-66P-201ENST00000365199 MSH5O43196 834 aa13.49□□□□□ -0.25
RNU4-66P-201ENST00000365199 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
RNU4-66P-201ENST00000365199 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
RNU4-66P-201ENST00000365199 MAPK8IP2Q13387 824 aaPredicted RBP12.57□□□□□ -0.4
RNU4-66P-201ENST00000365199 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
RNU4-66P-201ENST00000365199 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
RNU4-66P-201ENST00000365199 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
RNU4-66P-201ENST00000365199 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
RNU4-66P-201ENST00000365199 KCNA4P22459 653 aa12.27□□□□□ -0.45
RNU4-66P-201ENST00000365199 RNF216Q9NWF9 866 aaPredicted RBP12.22□□□□□ -0.45
RNU4-66P-201ENST00000365199 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
RNU4-66P-201ENST00000365199 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
RNU4-66P-201ENST00000365199 DNAJC5BQ9UF47 199 aa11.96□□□□□ -0.49
RNU4-66P-201ENST00000365199 DCAF8L1A6NGE4 600 aa11.86□□□□□ -0.51
RNU4-66P-201ENST00000365199 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
RNU4-66P-201ENST00000365199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
RNU4-66P-201ENST00000365199 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
RNU4-66P-201ENST00000365199 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
RNU4-66P-201ENST00000365199 C1QBPQ07021 282 aaKnown RBP11.41□□□□□ -0.58
RNU4-66P-201ENST00000365199 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
RNU4-66P-201ENST00000365199 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
RNU4-66P-201ENST00000365199 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RNU4-66P-201ENST00000365199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.27□□□□□ -0.61
RNU4-66P-201ENST00000365199 ZBTB22O15209 634 aa11.27□□□□□ -0.61
RNU4-66P-201ENST00000365199 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
RNU4-66P-201ENST00000365199 HNRNPUL2Q1KMD3 747 aaKnown RBP11.27□□□□□ -0.61
RNU4-66P-201ENST00000365199 SAMD1Q6SPF0 538 aaPredicted RBP11.2□□□□□ -0.62
RNU4-66P-201ENST00000365199 APLP2Q06481 763 aa11.18□□□□□ -0.62
RNU4-66P-201ENST00000365199 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
RNU4-66P-201ENST00000365199 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
RNU4-66P-201ENST00000365199 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
RNU4-66P-201ENST00000365199 CAPN15O75808 1086 aa11.04□□□□□ -0.64
RNU4-66P-201ENST00000365199 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
RNU4-66P-201ENST00000365199 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
RNU4-66P-201ENST00000365199 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
RNU4-66P-201ENST00000365199 DSG3P32926 999 aa10.92□□□□□ -0.66
RNU4-66P-201ENST00000365199 ATF5Q9Y2D1 282 aaPredicted RBP10.92□□□□□ -0.66
RNU4-66P-201ENST00000365199 ABCB7O75027 752 aa10.78□□□□□ -0.68
RNU4-66P-201ENST00000365199 POLA2Q14181 598 aa10.77□□□□□ -0.69
RNU4-66P-201ENST00000365199 ZBTB12Q9Y330 459 aaPredicted RBP10.64□□□□□ -0.71
RNU4-66P-201ENST00000365199 FBLN2P98095 1184 aa10.52□□□□□ -0.73
RNU4-66P-201ENST00000365199 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
RNU4-66P-201ENST00000365199 RBM42Q9BTD8 480 aaKnown RBP10.45□□□□□ -0.74
RNU4-66P-201ENST00000365199 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
RNU4-66P-201ENST00000365199 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
RNU4-66P-201ENST00000365199 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
RNU4-66P-201ENST00000365199 SPDYE2Q495Y8 402 aa10.33□□□□□ -0.76
RNU4-66P-201ENST00000365199 AKT1S1Q96B36 256 aa10.29□□□□□ -0.76
RNU4-66P-201ENST00000365199 ZNF692Q9BU19 519 aaPredicted RBP10.24□□□□□ -0.77
RNU4-66P-201ENST00000365199 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
RNU4-66P-201ENST00000365199 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
RNU4-66P-201ENST00000365199 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
RNU4-66P-201ENST00000365199 PABPN1Q86U42 306 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNU4-66P-201ENST00000365199 FKBP8Q14318 412 aa10.06□□□□□ -0.8
RNU4-66P-201ENST00000365199 PROM2Q8N271 834 aa10.06□□□□□ -0.8
RNU4-66P-201ENST00000365199 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
RNU4-66P-201ENST00000365199 PITPNM1O00562 1244 aa10.02□□□□□ -0.81
RNU4-66P-201ENST00000365199 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
RNU4-66P-201ENST00000365199 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
RNU4-66P-201ENST00000365199 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
RNU4-66P-201ENST00000365199 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
RNU4-66P-201ENST00000365199 PRR29P0C7W0 189 aa9.88□□□□□ -0.83
RNU4-66P-201ENST00000365199 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
RNU4-66P-201ENST00000365199 POTEHQ6S545 545 aa9.83□□□□□ -0.84
RNU4-66P-201ENST00000365199 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
RNU4-66P-201ENST00000365199 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
RNU4-66P-201ENST00000365199 CREBZFQ9NS37 354 aa9.73□□□□□ -0.85
RNU4-66P-201ENST00000365199 CHADLQ6NUI6 762 aa9.7□□□□□ -0.86
RNU4-66P-201ENST00000365199 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
RNU4-66P-201ENST00000365199 MIER1Q8N108 512 aa9.65□□□□□ -0.86
RNU4-66P-201ENST00000365199 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.86
RNU4-66P-201ENST00000365199 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
RNU4-66P-201ENST00000365199 VASPP50552 380 aaPredicted RBP9.62□□□□□ -0.87
RNU4-66P-201ENST00000365199 PLCD3Q8N3E9 789 aa9.62□□□□□ -0.87
RNU4-66P-201ENST00000365199 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
RNU4-66P-201ENST00000365199 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
RNU4-66P-201ENST00000365199 C19orf67A6NJJ6 358 aa9.56□□□□□ -0.88
RNU4-66P-201ENST00000365199 HAX1O00165 279 aa9.54□□□□□ -0.88
RNU4-66P-201ENST00000365199 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
RNU4-66P-201ENST00000365199 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
RNU4-66P-201ENST00000365199 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
RNU4-66P-201ENST00000365199 NUBP1P53384 320 aa9.45□□□□□ -0.9
RNU4-66P-201ENST00000365199 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
RNU4-66P-201ENST00000365199 EVX2Q03828 476 aa9.44□□□□□ -0.9
RNU4-66P-201ENST00000365199 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
RNU4-66P-201ENST00000365199 CLCN6P51797 869 aa9.4□□□□□ -0.9
RNU4-66P-201ENST00000365199 RASEFQ8IZ41 740 aa9.4□□□□□ -0.9
RNU4-66P-201ENST00000365199 SPOCK2Q92563 424 aa9.4□□□□□ -0.9
RNU4-66P-201ENST00000365199 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
RNU4-66P-201ENST00000365199 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
RNU4-66P-201ENST00000365199 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms