Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CD99P1-205ENST00000527459 561 ntBASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 AC233263.1-201ENST00000578059 224 ntBASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA11Q9Y5H2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 C1QL1P1-201ENST00000568105 661 ntBASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 AL023875.1-201ENST00000640777 796 ntBASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA11Q9Y5H2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 KRASP1-201ENST00000407852 552 ntBASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA11Q9Y5H2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 KRT16P5-201ENST00000455284 522 ntBASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 RN7SL471P-201ENST00000580476 299 ntBASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 AC006058.3-201ENST00000606217 1069 ntBASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA11Q9Y5H2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms