Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 NEFHP1-201ENST00000412845 2629 ntBASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGB3Q9Y5G1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 MIR718-201ENST00000390190 70 ntBASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 PRKY-204ENST00000533551 1019 ntBASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGB3Q9Y5G1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDHGB3Q9Y5G1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHGB3Q9Y5G1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGB3Q9Y5G1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 RPS2P4-201ENST00000476944 856 ntBASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 C1QBPP2-201ENST00000528754 825 ntBASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGB3Q9Y5G1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 FAM197Y4-202ENST00000622692 608 ntBASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHGB3Q9Y5G1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDHGB3Q9Y5G1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms