Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC093525.10-201ENST00000625130 1569 ntBASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 AC009113.1-201ENST00000570267 2443 ntBASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPS28Q9Y2Q9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 WIZP1-201ENST00000531444 2299 ntBASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 MIPEPP3-201ENST00000412105 444 ntBASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 HTR7P1-202ENST00000624664 4411 ntBASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MRPS28Q9Y2Q9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 CDCA4P2-201ENST00000441182 718 ntBASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 AC026185.1-201ENST00000445748 174 ntBASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 AC007613.1-201ENST00000572811 2597 ntBASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPS28Q9Y2Q9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPS28Q9Y2Q9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms