Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHMP2BQ9UQN3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 AL031598.1-201ENST00000561511 1773 ntBASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 NCF1B-203ENST00000435988 1254 ntBASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 AC060766.5-201ENST00000590539 871 ntBASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHMP2BQ9UQN3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 AC138932.1-201ENST00000534164 6830 ntBASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 KRT18P16-201ENST00000510337 1294 ntBASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 WIZP1-201ENST00000531444 2299 ntBASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.47■□□□□ 0.71
CHMP2BQ9UQN3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 AC083880.1-201ENST00000608266 535 ntBASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 AC120498.8-201ENST00000614275 531 ntBASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms