Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 HMGA1P5-201ENST00000412453 271 ntBASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 UPK3BP1-201ENST00000428678 509 ntBASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 FAM87A-204ENST00000613235 858 ntBASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDZRN3Q9UPQ7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 AC004980.1-204ENST00000429707 299 ntBASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 AC011506.1-201ENST00000474329 610 ntBASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDZRN3Q9UPQ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 BX323043.1-201ENST00000641006 1765 ntBASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 AP000974.1-201ENST00000623909 2387 ntBASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 CRYGFP-201ENST00000418459 633 ntBASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MYC-208ENST00000641036 567 ntBASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC24.65■■□□□ 1.54
PDZRN3Q9UPQ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.64■■□□□ 1.54
PDZRN3Q9UPQ7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.64■■□□□ 1.53
PDZRN3Q9UPQ7 AP001271.2-201ENST00000624018 1556 ntBASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 YBX1P10-201ENST00000444752 975 ntBASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 AP000692.2-201ENST00000608391 879 ntBASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 AL358472.4-201ENST00000633140 710 ntBASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDZRN3Q9UPQ7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms