Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
VTI1BQ9UEU0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VTI1BQ9UEU0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VTI1BQ9UEU0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VTI1BQ9UEU0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VTI1BQ9UEU0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 IRX1P1-201ENST00000438849 1838 ntBASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 AC005829.2-201ENST00000571422 1056 ntBASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 LETM1P2-201ENST00000597330 2178 ntBASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 FP475955.4-201ENST00000623131 1990 ntBASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VTI1BQ9UEU0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 AC007613.1-201ENST00000572811 2597 ntBASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VTI1BQ9UEU0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AC104417.2-201ENST00000562989 1793 ntBASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 UNC93B5-201ENST00000530315 699 ntBASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AC026471.1-201ENST00000564629 3026 ntBASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VTI1BQ9UEU0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms