Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.58■□□□□ 0.56
CPNE7Q9UBL6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.58■□□□□ 0.56
CPNE7Q9UBL6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE7Q9UBL6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPNE7Q9UBL6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 TSPY21P-201ENST00000433481 731 ntBASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 TSPY23P-201ENST00000440136 739 ntBASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
CPNE7Q9UBL6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.56■□□□□ 0.56
CPNE7Q9UBL6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 AL049597.2-201ENST00000565575 961 ntBASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CPNE7Q9UBL6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
CPNE7Q9UBL6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms