Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 CD177P1-201ENST00000606252 935 ntBASIC17.91■□□□□ 0.46
CNIH4Q9P003 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CNIH4Q9P003 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CNIH4Q9P003 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CNIH4Q9P003 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CNIH4Q9P003 KRT8P8-201ENST00000434750 1448 ntBASIC17.89■□□□□ 0.46
CNIH4Q9P003 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH4Q9P003 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH4Q9P003 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH4Q9P003 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.46
CNIH4Q9P003 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNIH4Q9P003 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.89■□□□□ 0.45
CNIH4Q9P003 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 KRT16P1-201ENST00000399124 1418 ntBASIC17.89■□□□□ 0.45
CNIH4Q9P003 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNIH4Q9P003 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 FAM197Y1-201ENST00000421178 764 ntBASIC17.88■□□□□ 0.45
CNIH4Q9P003 TSPY7P-201ENST00000431358 1114 ntBASIC17.88■□□□□ 0.45
CNIH4Q9P003 AL355355.2-201ENST00000442321 338 ntBASIC17.88■□□□□ 0.45
CNIH4Q9P003 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNIH4Q9P003 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 AC093503.3-201ENST00000624917 2352 ntBASIC17.88■□□□□ 0.45
CNIH4Q9P003 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNIH4Q9P003 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms