Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 TEX21P-204ENST00000641479 1693 ntBASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPHK1Q9NYA1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPHK1Q9NYA1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.54
SPHK1Q9NYA1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 AL032819.2-201ENST00000624543 2162 ntBASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 NAPSB-206ENST00000562112 1266 ntBASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SPHK1Q9NYA1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 AC116562.4-201ENST00000641316 2276 ntBASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 AC012306.2-201ENST00000609350 630 ntBASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.44■□□□□ 0.54
SPHK1Q9NYA1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 TSPY21P-201ENST00000433481 731 ntBASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PRSS44-201ENST00000515154 1146 ntBASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 AC097493.4-201ENST00000641197 219 ntBASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.43■□□□□ 0.54
SPHK1Q9NYA1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SPHK1Q9NYA1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms