Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 AL031432.3-201ENST00000607698 485 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 AC105020.6-201ENST00000621523 1217 ntBASIC18.54■□□□□ 0.56
NDE1Q9NXR1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDE1Q9NXR1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NDE1Q9NXR1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
NDE1Q9NXR1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDE1Q9NXR1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NDE1Q9NXR1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.51■□□□□ 0.55
NDE1Q9NXR1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NDE1Q9NXR1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 KRT19P1-201ENST00000405746 1186 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 AC123595.1-201ENST00000440769 1046 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 TERF1P5-201ENST00000477545 1207 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 MYCNOS-205ENST00000641950 531 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 AC018553.1-201ENST00000616682 1458 ntBASIC18.5■□□□□ 0.55
NDE1Q9NXR1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NDE1Q9NXR1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms