Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 AC008406.3-201ENST00000620001 1374 ntBASIC17.79■□□□□ 0.44
CHCHD3Q9NX63 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 CDV3P1-201ENST00000471403 739 ntBASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SLC7A5P2-201ENST00000553010 536 ntBASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHCHD3Q9NX63 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 AC091799.1-201ENST00000422823 811 ntBASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 PBX2P1-201ENST00000493219 1291 ntBASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 AC243732.1-201ENST00000612648 864 ntBASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CHCHD3Q9NX63 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CHCHD3Q9NX63 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 EDA-201ENST00000338901 1233 ntBASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 CCDC92B-201ENST00000575506 885 ntBASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CHCHD3Q9NX63 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms