Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 AC024243.1-201ENST00000609234 778 ntBASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRMT13Q9NUP7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TRMT13Q9NUP7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRMT13Q9NUP7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AC034232.1-201ENST00000506026 1064 ntBASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 MIR3652-201ENST00000579335 131 ntBASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AC092329.2-201ENST00000598402 547 ntBASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRMT13Q9NUP7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 ZNF815P-204ENST00000434898 1737 ntBASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 AL137060.1-201ENST00000618151 2648 ntBASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 AC246785.2-201ENST00000432512 513 ntBASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 PRELID1P1-202ENST00000567272 903 ntBASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 AC011498.5-201ENST00000592027 486 ntBASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRMT13Q9NUP7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 AC036111.1-201ENST00000533973 1582 ntBASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 SDHAP1-207ENST00000440850 2000 ntBASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRMT13Q9NUP7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms