Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 RPS2P4-201ENST00000476944 856 ntBASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 AC107956.1-201ENST00000494359 873 ntBASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.35■□□□□ 0.53
NECTIN3Q9NQS3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NECTIN3Q9NQS3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 HCG11-201ENST00000411553 5696 ntBASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NECTIN3Q9NQS3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 C1QL1P1-201ENST00000568105 661 ntBASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 AC233702.5-201ENST00000584107 538 ntBASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.33■□□□□ 0.52
NECTIN3Q9NQS3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 MIR718-201ENST00000390190 70 ntBASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AC012618.2-201ENST00000428058 849 ntBASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AF186192.3-201ENST00000583427 947 ntBASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.32■□□□□ 0.52
NECTIN3Q9NQS3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms