Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SYNCQ9H7C4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCQ9H7C4 HTR7P1-201ENST00000538670 1336 ntBASIC20.4■□□□□ 0.86
SYNCQ9H7C4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNCQ9H7C4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNCQ9H7C4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.39■□□□□ 0.86
SYNCQ9H7C4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 HLA-A-209ENST00000638375 975 ntBASIC20.39■□□□□ 0.85
SYNCQ9H7C4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 AC090340.1-201ENST00000620778 4980 ntBASIC20.39■□□□□ 0.85
SYNCQ9H7C4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNCQ9H7C4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 AC098590.1-201ENST00000468126 897 ntBASIC20.38■□□□□ 0.85
SYNCQ9H7C4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
SYNCQ9H7C4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 AL353807.1-201ENST00000427475 662 ntBASIC20.37■□□□□ 0.85
SYNCQ9H7C4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 AL160286.2-201ENST00000567150 934 ntBASIC20.37■□□□□ 0.85
SYNCQ9H7C4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNCQ9H7C4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 GCSHP5-201ENST00000443090 522 ntBASIC20.36■□□□□ 0.85
SYNCQ9H7C4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNCQ9H7C4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms