Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
VCX3BQ9H321 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 AL162741.1-201ENST00000565563 1558 ntBASIC18.23■□□□□ 0.51
VCX3BQ9H321 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.23■□□□□ 0.51
VCX3BQ9H321 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VCX3BQ9H321 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VCX3BQ9H321 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.22■□□□□ 0.51
VCX3BQ9H321 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 IRX1P1-201ENST00000438849 1838 ntBASIC18.21■□□□□ 0.51
VCX3BQ9H321 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 ESPNP-201ENST00000270691 2015 ntBASIC18.21■□□□□ 0.51
VCX3BQ9H321 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VCX3BQ9H321 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VCX3BQ9H321 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 GNAS-203ENST00000306120 1878 ntBASIC18.2■□□□□ 0.5
VCX3BQ9H321 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VCX3BQ9H321 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.2■□□□□ 0.5
VCX3BQ9H321 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms