Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 MKRN4P-201ENST00000444706 1521 ntBASIC19.95■□□□□ 0.78
DDX47Q9H0S4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX47Q9H0S4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 KRT8P8-201ENST00000434750 1448 ntBASIC19.94■□□□□ 0.78
DDX47Q9H0S4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 BX276092.2-201ENST00000417668 665 ntBASIC19.94■□□□□ 0.78
DDX47Q9H0S4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX47Q9H0S4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.93■□□□□ 0.78
DDX47Q9H0S4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX47Q9H0S4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 PCDHB18P-201ENST00000524813 2368 ntBASIC19.92■□□□□ 0.78
DDX47Q9H0S4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 AC026271.2-201ENST00000428091 497 ntBASIC19.92■□□□□ 0.78
DDX47Q9H0S4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.92■□□□□ 0.78
DDX47Q9H0S4 RPS2P52-201ENST00000469610 820 ntBASIC19.92■□□□□ 0.78
DDX47Q9H0S4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 FEM1AP3-201ENST00000403722 1741 ntBASIC19.92■□□□□ 0.78
DDX47Q9H0S4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX47Q9H0S4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 NOC2LP1-202ENST00000452600 2235 ntBASIC19.91■□□□□ 0.78
DDX47Q9H0S4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
DDX47Q9H0S4 ANO7L1-203ENST00000602586 1720 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms