Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAF4Q9BUZ4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 TREX1-205ENST00000625293 1783 ntBASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 MIR4785-201ENST00000585005 73 ntBASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF4Q9BUZ4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 BX088651.1-201ENST00000540551 451 ntBASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF4Q9BUZ4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 ECEL1P3-201ENST00000427961 737 ntBASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 AL121906.2-201ENST00000621597 723 ntBASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 PRORSD1P-202ENST00000563365 2154 ntBASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TRAF4Q9BUZ4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAF4Q9BUZ4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms