Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 AL512353.2-201ENST00000448759 1962 ntBASIC16.17■□□□□ 0.18
HDHD3Q9BSH5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 YBX1P10-201ENST00000444752 975 ntBASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 AC005332.8-201ENST00000622750 2735 ntBASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HDHD3Q9BSH5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AC090164.3-201ENST00000610780 2143 ntBASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AC083906.2-201ENST00000511578 360 ntBASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AL137784.2-201ENST00000607332 1000 ntBASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AC093525.10-201ENST00000625130 1569 ntBASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 Z98044.1-201ENST00000632503 1764 ntBASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDHD3Q9BSH5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDHD3Q9BSH5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDHD3Q9BSH5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDHD3Q9BSH5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDHD3Q9BSH5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDHD3Q9BSH5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 AC092368.3-202ENST00000574180 1591 ntBASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 AL121832.2-201ENST00000610979 668 ntBASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 AC092118.2-201ENST00000613495 667 ntBASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 AL121906.2-201ENST00000621597 723 ntBASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HDHD3Q9BSH5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms