Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 AL354751.1-201ENST00000412768 1863 ntBASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 AC026471.1-201ENST00000564629 3026 ntBASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 PNMA6B-201ENST00000538162 1200 ntBASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPPED1Q9BRF8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 AC006970.2-201ENST00000450065 779 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 AC060766.5-201ENST00000590539 871 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 AL137784.2-201ENST00000607332 1000 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 AC120498.8-201ENST00000614275 531 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 AL121829.2-201ENST00000620908 328 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 LETM1P2-201ENST00000597330 2178 ntBASIC18■□□□□ 0.47
CPPED1Q9BRF8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CPPED1Q9BRF8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CPPED1Q9BRF8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CPPED1Q9BRF8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPPED1Q9BRF8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms