Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RNF2Q99496 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF2Q99496 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
RNF2Q99496 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF2Q99496 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF2Q99496 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF2Q99496 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RNF2Q99496 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 AC007613.1-201ENST00000572811 2597 ntBASIC15.23■□□□□ 0.03
RNF2Q99496 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF2Q99496 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RNF2Q99496 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 CROCCP3-202ENST00000420820 1947 ntBASIC15.22■□□□□ 0.03
RNF2Q99496 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF2Q99496 HLA-L-209ENST00000420110 1011 ntBASIC15.22■□□□□ 0.03
RNF2Q99496 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.22■□□□□ 0.03
RNF2Q99496 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RNF2Q99496 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF2Q99496 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF2Q99496 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF2Q99496 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF2Q99496 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF2Q99496 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF2Q99496 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF2Q99496 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF2Q99496 AC091874.3-201ENST00000512672 1195 ntBASIC15.21■□□□□ 0.03
RNF2Q99496 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.21■□□□□ 0.03
RNF2Q99496 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 NOC2LP1-202ENST00000452600 2235 ntBASIC15.21■□□□□ 0.03
RNF2Q99496 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF2Q99496 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF2Q99496 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms