Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHIPQ96QV1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HHIPQ96QV1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHIPQ96QV1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HHIPQ96QV1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HHIPQ96QV1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
HHIPQ96QV1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.39■□□□□ 0.7
HHIPQ96QV1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.39■□□□□ 0.7
HHIPQ96QV1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 CLEC4GP1-201ENST00000596555 870 ntBASIC19.39■□□□□ 0.69
HHIPQ96QV1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.39■□□□□ 0.69
HHIPQ96QV1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HHIPQ96QV1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 TCF3P1-201ENST00000423021 1937 ntBASIC19.38■□□□□ 0.69
HHIPQ96QV1 AC112907.2-201ENST00000448639 330 ntBASIC19.38■□□□□ 0.69
HHIPQ96QV1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 AC112907.3-201ENST00000577781 2400 ntBASIC19.38■□□□□ 0.69
HHIPQ96QV1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
HHIPQ96QV1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.37■□□□□ 0.69
HHIPQ96QV1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HHIPQ96QV1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.37■□□□□ 0.69
HHIPQ96QV1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HHIPQ96QV1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HHIPQ96QV1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HHIPQ96QV1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.36■□□□□ 0.69
HHIPQ96QV1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.36■□□□□ 0.69
HHIPQ96QV1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms