Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 AL031133.1-201ENST00000406807 723 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 FAM8A6P-201ENST00000407496 1135 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 TSPY23P-201ENST00000440136 739 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 AL359075.1-203ENST00000462729 1002 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 PRSS44-201ENST00000515154 1146 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 MYC-208ENST00000641036 567 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 AC125437.2-201ENST00000625180 2167 ntBASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC85AQ96PX6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC85AQ96PX6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 AC140113.3-201ENST00000605663 199 ntBASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC85AQ96PX6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC85AQ96PX6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms