Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RTP4Q96DX8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RTP4Q96DX8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 AL596275.1-201ENST00000423464 877 ntBASIC19.54■□□□□ 0.72
RTP4Q96DX8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 KRT16P5-201ENST00000455284 522 ntBASIC19.54■□□□□ 0.72
RTP4Q96DX8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RTP4Q96DX8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RTP4Q96DX8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 UBE2SP1-201ENST00000450587 669 ntBASIC19.53■□□□□ 0.72
RTP4Q96DX8 AC133681.1-201ENST00000465482 601 ntBASIC19.53■□□□□ 0.72
RTP4Q96DX8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RTP4Q96DX8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RTP4Q96DX8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 Z85996.1-201ENST00000494644 937 ntBASIC19.52■□□□□ 0.72
RTP4Q96DX8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RTP4Q96DX8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.52■□□□□ 0.72
RTP4Q96DX8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RTP4Q96DX8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 AC239809.2-201ENST00000415381 517 ntBASIC19.51■□□□□ 0.71
RTP4Q96DX8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 AC008550.1-201ENST00000511500 884 ntBASIC19.51■□□□□ 0.71
RTP4Q96DX8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.51■□□□□ 0.71
RTP4Q96DX8 AC124016.1-201ENST00000609552 612 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms