Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEMA4DQ92854 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA4DQ92854 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 KRT8P11-201ENST00000409686 1436 ntBASIC20.61■□□□□ 0.89
SEMA4DQ92854 FEM1AP3-201ENST00000403722 1741 ntBASIC20.61■□□□□ 0.89
SEMA4DQ92854 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 B3GAT3P1-201ENST00000471720 806 ntBASIC20.61■□□□□ 0.89
SEMA4DQ92854 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 AC130371.2-201ENST00000619443 611 ntBASIC20.61■□□□□ 0.89
SEMA4DQ92854 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA4DQ92854 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.61■□□□□ 0.89
SEMA4DQ92854 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 AC004951.3-201ENST00000418645 1148 ntBASIC20.6■□□□□ 0.89
SEMA4DQ92854 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 TSPY21P-201ENST00000433481 731 ntBASIC20.6■□□□□ 0.89
SEMA4DQ92854 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 AC026271.3-201ENST00000571884 352 ntBASIC20.6■□□□□ 0.89
SEMA4DQ92854 MIR6786-201ENST00000616843 113 ntBASIC20.6■□□□□ 0.89
SEMA4DQ92854 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.6■□□□□ 0.89
SEMA4DQ92854 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SEMA4DQ92854 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 AC011298.2-201ENST00000617989 482 ntBASIC20.59■□□□□ 0.89
SEMA4DQ92854 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SEMA4DQ92854 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SEMA4DQ92854 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA4DQ92854 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA4DQ92854 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA4DQ92854 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SEMA4DQ92854 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 NUDT16P1-203ENST00000513809 620 ntBASIC20.58■□□□□ 0.89
SEMA4DQ92854 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SEMA4DQ92854 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SEMA4DQ92854 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SEMA4DQ92854 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.57■□□□□ 0.88
SEMA4DQ92854 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms