Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3S1Q92572 AP001160.3-201ENST00000601484 763 ntBASIC16.88■□□□□ 0.29
AP3S1Q92572 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.88■□□□□ 0.29
AP3S1Q92572 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.88■□□□□ 0.29
AP3S1Q92572 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP3S1Q92572 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP3S1Q92572 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP3S1Q92572 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.88■□□□□ 0.29
AP3S1Q92572 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ZNF815P-204ENST00000434898 1737 ntBASIC16.87■□□□□ 0.29
AP3S1Q92572 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S1Q92572 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S1Q92572 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 AC024257.2-201ENST00000549699 147 ntBASIC16.87■□□□□ 0.29
AP3S1Q92572 SLC7A5P1-201ENST00000568957 537 ntBASIC16.87■□□□□ 0.29
AP3S1Q92572 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
AP3S1Q92572 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 ANO7L1-203ENST00000602586 1720 ntBASIC16.87■□□□□ 0.29
AP3S1Q92572 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
AP3S1Q92572 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
AP3S1Q92572 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
AP3S1Q92572 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
AP3S1Q92572 CYP21A1P-202ENST00000354927 1481 ntBASIC16.86■□□□□ 0.29
AP3S1Q92572 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP3S1Q92572 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.86■□□□□ 0.29
AP3S1Q92572 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.86■□□□□ 0.29
AP3S1Q92572 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.86■□□□□ 0.29
AP3S1Q92572 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 AC135279.3-201ENST00000610945 1311 ntBASIC16.86■□□□□ 0.29
AP3S1Q92572 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP3S1Q92572 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3S1Q92572 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
AP3S1Q92572 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3S1Q92572 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
AP3S1Q92572 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3S1Q92572 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3S1Q92572 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3S1Q92572 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3S1Q92572 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3S1Q92572 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms