Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SPTSSB-204ENST00000617024 1292 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC009102.3-201ENST00000623118 1491 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 INGX-202ENST00000489074 768 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ELL2P1-201ENST00000413990 1906 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 GOLGA6L3-201ENST00000507199 1679 ntBASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC7.78□□□□□ -1.16
SYNE2Q8WXH0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC7.77□□□□□ -1.16
SYNE2Q8WXH0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
SYNE2Q8WXH0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
SYNE2Q8WXH0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 PDPK2P-202ENST00000562415 1191 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AC010336.2-201ENST00000564226 506 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 TUBB8P6-201ENST00000436895 1288 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 UGT1A2P-201ENST00000454886 866 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AL513190.1-201ENST00000621254 727 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 CYP51A1P2-201ENST00000419457 1499 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 CASP16P-204ENST00000635032 809 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AC109322.1-201ENST00000524499 1264 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 HLA-A-209ENST00000638375 975 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AL133338.1-201ENST00000565695 1517 ntBASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SYNE2Q8WXH0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 KRT18P2-201ENST00000447938 1258 ntBASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SYNE2Q8WXH0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms