Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC136944.6-201ENST00000634818 245 ntBASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 FAM8A6P-201ENST00000407496 1135 ntBASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 COX11P1-201ENST00000489116 835 ntBASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 LINC01238-205ENST00000567549 1107 ntBASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SHKBP1Q8TBC3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 MYC-208ENST00000641036 567 ntBASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.09■□□□□ 0.81
SHKBP1Q8TBC3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 TSPY5P-201ENST00000426936 936 ntBASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 AC011558.1-201ENST00000623459 338 ntBASIC20.08■□□□□ 0.81
SHKBP1Q8TBC3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHKBP1Q8TBC3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SHKBP1Q8TBC3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SHKBP1Q8TBC3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 AP003041.3-201ENST00000527151 707 ntBASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SHKBP1Q8TBC3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms