Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 KRT8P8-201ENST00000434750 1448 ntBASIC19.69■□□□□ 0.74
PAF1Q8N7H5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PAF1Q8N7H5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 RPS2P55-201ENST00000397318 883 ntBASIC19.68■□□□□ 0.74
PAF1Q8N7H5 AC107956.1-201ENST00000494359 873 ntBASIC19.68■□□□□ 0.74
PAF1Q8N7H5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PAF1Q8N7H5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
PAF1Q8N7H5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 C1QL1P1-201ENST00000568105 661 ntBASIC19.67■□□□□ 0.74
PAF1Q8N7H5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PAF1Q8N7H5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 AF186192.3-201ENST00000583427 947 ntBASIC19.66■□□□□ 0.74
PAF1Q8N7H5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 Z99916.2-201ENST00000604037 246 ntBASIC19.66■□□□□ 0.74
PAF1Q8N7H5 CR392000.1-201ENST00000624770 1228 ntBASIC19.66■□□□□ 0.74
PAF1Q8N7H5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 AFG3L1P-217ENST00000557444 2447 ntBASIC19.66■□□□□ 0.74
PAF1Q8N7H5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.66■□□□□ 0.74
PAF1Q8N7H5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.65■□□□□ 0.74
PAF1Q8N7H5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms