Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 AC073111.5-205ENST00000641717 521 ntBASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 BX276092.2-201ENST00000417668 665 ntBASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIML2Q8N7C3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 AC026185.1-201ENST00000445748 174 ntBASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 AL137784.2-201ENST00000607332 1000 ntBASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 AL133373.2-201ENST00000623187 2828 ntBASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIML2Q8N7C3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 AC104581.1-202ENST00000635932 2618 ntBASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 AP000997.3-201ENST00000623333 2250 ntBASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRIML2Q8N7C3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms