Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COMMD1Q8N668 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.88■□□□□ 0.13
COMMD1Q8N668 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 AC092368.3-202ENST00000574180 1591 ntBASIC15.87■□□□□ 0.13
COMMD1Q8N668 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 AC018470.1-201ENST00000624790 3129 ntBASIC15.87■□□□□ 0.13
COMMD1Q8N668 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 ESRRAP1-201ENST00000400596 1257 ntBASIC15.87■□□□□ 0.13
COMMD1Q8N668 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 AC026366.1-201ENST00000488803 879 ntBASIC15.87■□□□□ 0.13
COMMD1Q8N668 PNMA6B-201ENST00000538162 1200 ntBASIC15.87■□□□□ 0.13
COMMD1Q8N668 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.87■□□□□ 0.13
COMMD1Q8N668 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COMMD1Q8N668 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 AC090164.3-201ENST00000610780 2143 ntBASIC15.86■□□□□ 0.13
COMMD1Q8N668 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 KRT18P29-201ENST00000397031 1267 ntBASIC15.86■□□□□ 0.13
COMMD1Q8N668 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 AP003097.1-201ENST00000530657 1135 ntBASIC15.86■□□□□ 0.13
COMMD1Q8N668 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 MIR4651-201ENST00000582622 73 ntBASIC15.86■□□□□ 0.13
COMMD1Q8N668 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 MIR2861-201ENST00000636310 90 ntBASIC15.86■□□□□ 0.13
COMMD1Q8N668 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COMMD1Q8N668 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COMMD1Q8N668 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COMMD1Q8N668 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COMMD1Q8N668 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms