Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 YBX1P10-201ENST00000444752 975 ntBASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 MIR4497-201ENST00000583208 89 ntBASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 KRT17P2-201ENST00000300992 1314 ntBASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHMP1BQ7LBR1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP1BQ7LBR1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CHMP1BQ7LBR1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP1BQ7LBR1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 AL596275.1-201ENST00000423464 877 ntBASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 SNORA78-201ENST00000459373 127 ntBASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 AL049637.2-201ENST00000641778 930 ntBASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 AP001271.2-201ENST00000624018 1556 ntBASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.64■□□□□ 0.41
CHMP1BQ7LBR1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 AL512408.1-201ENST00000569378 2000 ntBASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.63■□□□□ 0.41
CHMP1BQ7LBR1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms