Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 CDV3P1-201ENST00000471403 739 ntBASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 AL591742.1-201ENST00000604433 565 ntBASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 TEX21P-204ENST00000641479 1693 ntBASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCNI2Q6ZMN8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 AC093525.10-201ENST00000625130 1569 ntBASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 LINC01023-201ENST00000606054 436 ntBASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 AL031963.3-201ENST00000606441 850 ntBASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.27■□□□□ 0.84
CCNI2Q6ZMN8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCNI2Q6ZMN8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 FAM197Y4-202ENST00000622692 608 ntBASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 AC068880.1-201ENST00000507289 2297 ntBASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 Z98044.1-201ENST00000632503 1764 ntBASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCNI2Q6ZMN8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 RPPH1-201ENST00000516869 333 ntBASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 AC008403.3-201ENST00000598924 454 ntBASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.25■□□□□ 0.83
CCNI2Q6ZMN8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms