Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 AL138966.2-201ENST00000621997 464 ntBASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3F3CQ6NXT2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 BX664615.1-201ENST00000443558 458 ntBASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3F3CQ6NXT2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 AC112907.3-201ENST00000577781 2400 ntBASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 DUX4L26-201ENST00000489078 1255 ntBASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 AL445228.2-201ENST00000605589 952 ntBASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3F3CQ6NXT2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 KRT18P35-201ENST00000510488 1269 ntBASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 AL512604.3-201ENST00000569583 964 ntBASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 AC006011.2-201ENST00000621313 1158 ntBASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.66■□□□□ 0.42
H3F3CQ6NXT2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms