Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 FEM1AP3-201ENST00000403722 1741 ntBASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.96■□□□□ 0.79
ATP13A4Q4VNC1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.95■□□□□ 0.79
ATP13A4Q4VNC1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.95■□□□□ 0.79
ATP13A4Q4VNC1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 KRT16P5-201ENST00000455284 522 ntBASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ATP13A4Q4VNC1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 AC110285.5-201ENST00000611501 352 ntBASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP13A4Q4VNC1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 KRT8P41-201ENST00000533985 1514 ntBASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATP13A4Q4VNC1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms